Os01g0862200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0862200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.58 | 0.442 | 13.3 | -1.36 | 0.792 | -1.86 | -0.924 | -3.38 | -1.08 | 19.1 | 1.264 | 1408 | -- | -- |
| 94.08 | 0.452 | 13.3 | -1.65 | 0.641 | -1.48 | -1.02 | -- | -1.06 | 17.8 | 2.47 | 1327 | -- | -- |
| 90.46 | 0.443 | 13.3 | -1.36 | 0.797 | -1.67 | -- | -2.83 | -1.08 | 19.2 | 1.689 | 1408 | -- | -- |
| 95.92 | 0.456 | 13.3 | -1.65 | 0.632 | -1.4 | -- | -- | -1.07 | 18.4 | 2.34 | 1335 | -- | -- |
| 98.95 | 0.463 | 13.4 | -1.69 | -- | -1.63 | -- | 0.482 | -1.25 | -- | 2.603 | 2415 | -- | -- |
| 115.9 | 0.505 | 13.3 | -1.45 | 0.863 | -- | -0.583 | -- | -0.975 | 19.8 | -- | -- | -- | -- |
| 116.83 | 0.506 | 13.3 | -1.44 | 0.861 | -- | -- | -- | -0.977 | 19.9 | -- | -- | -- | -- |
| 98.22 | 0.462 | 13.3 | -1.65 | -- | -1.71 | -- | -- | -1.16 | -- | 2.35 | 2412 | -- | -- |
| 150.15 | 0.571 | 13.4 | -- | 0.575 | -1.08 | -- | -- | -1.04 | 18.9 | 10 | 8320 | -- | -- |
| 157.17 | 0.586 | 13.3 | -1.45 | -- | -- | -- | -- | -0.988 | -- | -- | -- | -- | -- |
| 171.42 | 0.612 | 13.3 | -- | 0.872 | -- | -- | -- | -0.816 | 19.8 | -- | -- | -- | -- |
| 160.57 | 0.59 | 13.3 | -- | -- | -1.57 | -- | -- | -1.12 | -- | 10 | 6618 | -- | -- |
| 212.52 | 0.68 | 13.3 | -- | -- | -- | -- | -- | -0.828 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.26 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 2 | 81.39 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 6 | 82.35 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 10 | 82.51 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 13 | 82.63 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 25 | 83.08 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 75 | 84.27 | humidity | 80.0 | 14400 | > th | dose independent | sin | 20 | NA |
| 82 | 84.38 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 104 | 84.65 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 135 | 85.06 | humidity | 80.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 176 | 85.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 250 | 86.09 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 277 | 86.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 304 | 86.38 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 317 | 86.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 318 | 86.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 336 | 86.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 341 | 86.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 346 | 86.59 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 376 | 86.77 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 388 | 86.83 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 397 | 86.86 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 462 | 87.12 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 473 | 87.17 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 475 | 87.18 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 555 | 87.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 573 | 87.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 574 | 87.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 599 | 87.65 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 629 | 87.73 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 22 | 19 |
| 656 | 87.80 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 690 | 87.89 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 699 | 87.92 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 7 |
| 702 | 87.93 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 15 |
| 710 | 87.93 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 15 |
| 712 | 87.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 15 |
| 762 | 88.04 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 773 | 88.07 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 800 | 88.13 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 823 | 88.19 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 829 | 88.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 861 | 88.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 11 |
| 865 | 88.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 11 |
| 985 | 88.48 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 16 | NA |
| 987 | 88.48 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 16 | NA |
| 989 | 88.49 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 16 | NA |
| 991 | 88.49 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 19 |
| 992 | 88.49 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 19 |
| 994 | 88.49 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 19 |