Os01g0860900 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0860900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	4.67	(0.0452)	R²	:	0.409
β₁	:	-1.32	(0.166)	R²_dD	:	0.0852	R²_D	:	0.0124
β₂	:	1.55	(0.111)	R²_dC	:	0.255	R²_C	:	0.238
β₃	:	--	(--)	R²_dE	:	--	R²_E	:	--
β₄	:	-2.49	(0.445)	R²_dD*C	:	0.0412	R²_D*C	:	0.00311
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	-0.667	(0.0963)	R²_dN8	:	0.0832	R²_N8	:	0.0372
σ	:	0.85
deviance	:	328.55
__

_____

C
peak time of C	:	21.4
E
wheather	:	--
threshold	:	--
memory length	:	--
response mode	:	--
dose dependency	:	--
G
type of G	:	--
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
316.49	0.836	4.68	-1.52	1.48	0.72	-3.02	2.22	-0.634	21.3	24.6	30	--	--
321.66	0.835	4.64	-1.16	1.5	0.813	-2.65	--	-0.549	20.9	61.09	20	--	--
338.88	0.857	4.72	-1.62	1.68	0.504	--	3.25	-0.741	21.4	34.67	609	--	--
345.33	0.866	4.65	-1.08	1.51	0.763	--	--	-0.559	21.1	103.7	28	--	--
471.48	1.02	4.59	-0.97	--	1.25	--	-0.128	-0.497	--	34.67	609	--	--
328.55	0.85	4.67	-1.32	1.55	--	-2.49	--	-0.667	21.4	--	--	--	--
350.82	0.877	4.67	-1.23	1.56	--	--	--	-0.666	21.6	--	--	--	--
471.14	1.02	4.59	-0.987	--	1.28	--	--	-0.501	--	109.4	8	--	--
358.31	0.882	4.58	--	1.57	0.914	--	--	-0.256	21.6	59.93	47520	--	--
494.19	1.04	4.63	-1.22	--	--	--	--	-0.669	--	--	--	--	--
390.57	0.924	4.64	--	1.55	--	--	--	-0.529	21.6	--	--	--	--
495.27	1.04	4.56	--	--	1.57	--	--	-0.356	--	123.7	2	--	--
533.17	1.08	4.6	--	--	--	--	--	-0.535	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	305.63	radiation	1.0	90	< th	dose independent	rect.	4	21
2	306.92	radiation	1.0	90	< th	dose dependent	rect.	4	21
3	307.33	temperature	20.0	90	< th	dose independent	rect.	1	4
5	309.24	temperature	30.0	30	< th	dose dependent	rect.	13	17
9	309.56	temperature	30.0	30	< th	dose dependent	rect.	13	22
44	312.45	temperature	25.0	30	< th	dose independent	rect.	4	21
47	312.60	temperature	30.0	30	< th	dose dependent	rect.	4	21
55	312.77	atmosphere	1000.0	720	> th	dose independent	rect.	16	1
56	312.90	temperature	25.0	90	< th	dose independent	rect.	12	11
67	313.27	wind	3.0	90	< th	dose independent	rect.	1	9
75	313.38	atmosphere	1000.0	30	> th	dose dependent	rect.	4	7
85	313.54	temperature	30.0	30	< th	dose dependent	rect.	13	12
89	313.56	temperature	10.0	90	> th	dose dependent	rect.	5	23
90	313.57	temperature	20.0	90	> th	dose independent	rect.	5	23
93	313.65	humidity	70.0	30	> th	dose independent	rect.	14	11
96	313.67	temperature	25.0	30	< th	dose dependent	rect.	9	22
110	313.86	temperature	20.0	30	> th	dose dependent	rect.	13	15
118	314.03	temperature	30.0	90	< th	dose independent	rect.	13	16
122	314.11	wind	5.0	30	< th	dose independent	rect.	1	3
126	314.21	temperature	30.0	30	< th	dose dependent	rect.	1	3
130	314.27	wind	1.0	30	> th	dose independent	rect.	1	3
131	314.27	temperature	25.0	30	< th	dose dependent	rect.	3	19
138	314.33	temperature	25.0	10	< th	dose independent	rect.	13	11
179	314.62	humidity	50.0	30	> th	dose independent	rect.	4	21
187	314.69	temperature	25.0	10	< th	dose independent	rect.	13	18
191	314.70	temperature	25.0	90	> th	dose independent	rect.	12	11
198	314.73	wind	7.0	720	< th	dose independent	rect.	20	23
212	314.78	temperature	20.0	90	< th	dose independent	rect.	19	11
216	314.79	temperature	20.0	10	< th	dose dependent	rect.	1	4
219	314.81	temperature	25.0	90	< th	dose independent	rect.	12	22
228	314.87	wind	5.0	90	< th	dose dependent	rect.	1	9
246	314.95	atmosphere	1000.0	720	> th	dose independent	rect.	10	8
250	314.96	temperature	20.0	10	< th	dose independent	rect.	19	12
254	314.97	atmosphere	1000.0	270	> th	dose independent	rect.	14	10
256	314.97	temperature	25.0	90	< th	dose dependent	rect.	12	9
266	315.01	temperature	20.0	90	< th	dose independent	rect.	21	9
269	315.01	humidity	80.0	720	> th	dose dependent	rect.	6	11
286	315.09	wind	7.0	720	< th	dose independent	rect.	5	22
290	315.10	atmosphere	1005.0	30	> th	dose independent	rect.	4	7
310	315.18	temperature	20.0	10	< th	dose independent	rect.	11	20
314	315.19	temperature	20.0	30	> th	dose independent	rect.	11	17
317	315.21	temperature	25.0	30	< th	dose dependent	rect.	13	7
344	315.29	humidity	80.0	720	> th	dose dependent	rect.	6	7
363	315.36	humidity	80.0	720	> th	dose dependent	rect.	6	5
372	315.39	atmosphere	995.0	30	> th	dose independent	rect.	4	21
381	315.42	temperature	25.0	90	> th	dose independent	rect.	12	8
393	315.45	humidity	80.0	720	> th	dose dependent	rect.	6	9
402	315.49	wind	7.0	720	> th	dose independent	rect.	16	18
415	315.53	humidity	70.0	10	> th	dose independent	rect.	13	17
418	315.54	atmosphere	995.0	30	> th	dose dependent	rect.	1	3
431	315.59	atmosphere	1000.0	30	> th	dose independent	rect.	1	3
433	315.60	temperature	25.0	10	> th	dose independent	rect.	13	10
458	315.66	temperature	20.0	10	> th	dose dependent	rect.	13	10
470	315.71	radiation	1.0	90	< th	dose independent	rect.	4	8
471	315.72	radiation	1.0	90	< th	dose independent	rect.	4	6
480	315.74	radiation	1.0	90	< th	dose independent	rect.	4	4
490	315.75	temperature	20.0	10	> th	dose dependent	rect.	13	8
508	315.80	wind	9.0	30	< th	dose dependent	rect.	1	3
511	315.82	temperature	25.0	10	> th	dose independent	rect.	13	8
514	315.82	radiation	1.0	270	> th	dose independent	rect.	9	23
520	315.84	radiation	1.0	90	< th	dose independent	rect.	4	13
545	315.89	precipitation	0.1	30	< th	dose independent	rect.	1	3
547	315.89	precipitation	0.1	30	< th	dose dependent	rect.	1	3
552	315.90	radiation	10.0	30	< th	dose dependent	rect.	4	11
555	315.91	temperature	10.0	30	> th	dose independent	rect.	1	3
558	315.91	humidity	50.0	30	> th	dose independent	rect.	1	3
562	315.91	atmosphere	1010.0	30	< th	dose independent	rect.	1	3
564	315.91	radiation	1.0	30	< th	dose independent	rect.	1	3
570	315.91	temperature	10.0	30	> th	dose independent	rect.	4	21
572	315.91	radiation	1.0	30	< th	dose dependent	rect.	1	3
585	315.93	wind	9.0	4320	< th	dose independent	rect.	2	3
588	315.93	temperature	25.0	10	< th	dose dependent	sin	21	NA
590	315.94	precipitation	0.1	30	< th	dose independent	rect.	4	21
593	315.94	precipitation	0.1	30	< th	dose dependent	rect.	4	21
602	315.96	humidity	50.0	270	> th	dose independent	rect.	1	23
627	316.04	humidity	80.0	270	> th	dose independent	rect.	10	1
633	316.05	temperature	30.0	30	< th	dose dependent	rect.	17	18
641	316.07	humidity	70.0	270	> th	dose dependent	rect.	9	2
643	316.08	wind	5.0	270	< th	dose independent	rect.	22	9
650	316.09	temperature	20.0	90	< th	dose independent	sin	8	NA
651	316.09	temperature	20.0	270	< th	dose independent	rect.	24	1
654	316.09	radiation	1.0	90	< th	dose dependent	rect.	4	8
659	316.11	radiation	1.0	90	< th	dose dependent	rect.	4	6
661	316.12	radiation	1.0	90	< th	dose dependent	rect.	4	4
671	316.15	atmosphere	1000.0	30	> th	dose independent	rect.	16	12
675	316.17	wind	3.0	90	< th	dose independent	rect.	1	14
693	316.21	atmosphere	1005.0	90	> th	dose dependent	rect.	3	2
698	316.21	radiation	10.0	30	< th	dose dependent	rect.	19	23
703	316.23	wind	7.0	720	< th	dose independent	rect.	6	17
704	316.23	temperature	20.0	10	> th	dose dependent	sin	17	NA
721	316.28	temperature	25.0	10	< th	dose independent	rect.	13	22
722	316.28	wind	5.0	720	> th	dose dependent	rect.	17	17
730	316.31	temperature	30.0	30	< th	dose dependent	rect.	17	13
755	316.39	wind	5.0	270	> th	dose dependent	rect.	2	1
756	316.39	wind	5.0	720	> th	dose dependent	rect.	17	2
778	316.46	wind	7.0	720	< th	dose independent	rect.	11	7
796	316.49	wind	7.0	30	< th	dose dependent	rect.	1	7
849	316.59	humidity	80.0	720	> th	dose independent	rect.	6	7
857	316.60	humidity	90.0	720	> th	dose independent	rect.	5	13
860	316.60	temperature	25.0	30	< th	dose dependent	no	NA	NA
868	316.61	humidity	50.0	30	> th	dose dependent	rect.	1	3
876	316.62	temperature	25.0	30	< th	dose dependent	rect.	17	23
888	316.64	temperature	25.0	30	< th	dose dependent	rect.	19	23
903	316.67	atmosphere	1005.0	10	> th	dose dependent	rect.	24	11
913	316.69	humidity	70.0	30	> th	dose independent	rect.	19	6
919	316.69	temperature	25.0	30	< th	dose dependent	rect.	15	23
920	316.69	temperature	25.0	30	< th	dose dependent	rect.	21	23
921	316.70	wind	5.0	270	> th	dose independent	rect.	2	1
922	316.70	wind	9.0	30	< th	dose independent	rect.	4	21
926	316.71	humidity	80.0	720	> th	dose independent	rect.	6	5
964	316.79	humidity	70.0	10	> th	dose independent	sin	12	NA
970	316.80	temperature	25.0	90	> th	dose independent	sin	19	NA
979	316.81	wind	5.0	270	> th	dose dependent	rect.	2	3
994	316.84	precipitation	0.1	720	< th	dose independent	rect.	4	16
996	316.84	precipitation	0.1	720	< th	dose dependent	rect.	4	16