Os01g0860700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0860700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.22 | 0.544 | 8.43 | 1.04 | 0.879 | -1.64 | 0.466 | 0.0349 | -0.336 | 8.8 | 22 | 1718 | -- | -- |
| 133.02 | 0.537 | 8.43 | 0.982 | 0.901 | -1.65 | 0.514 | -- | -0.342 | 8.54 | 22.03 | 1478 | -- | -- |
| 133.45 | 0.538 | 8.42 | 1.04 | 0.91 | -1.63 | -- | 0.155 | -0.317 | 8.61 | 22.11 | 1480 | -- | -- |
| 133.48 | 0.538 | 8.43 | 0.984 | 0.898 | -1.63 | -- | -- | -0.339 | 8.62 | 22.1 | 1480 | -- | -- |
| 163.12 | 0.595 | 8.43 | 1.17 | -- | -1.55 | -- | 0.613 | -0.297 | -- | 22.3 | 801 | -- | -- |
| 228.8 | 0.709 | 8.55 | 0.371 | 0.894 | -- | 0.387 | -- | -0.875 | 8.81 | -- | -- | -- | -- |
| 229.28 | 0.709 | 8.55 | 0.385 | 0.891 | -- | -- | -- | -0.875 | 8.89 | -- | -- | -- | -- |
| 162.33 | 0.593 | 8.46 | 0.893 | -- | -1.55 | -- | -- | -0.347 | -- | 22.28 | 801 | -- | -- |
| 155.51 | 0.581 | 8.47 | -- | 0.891 | -1.35 | -- | -- | -0.502 | 8.45 | 22.36 | 1390 | -- | -- |
| 274.6 | 0.774 | 8.58 | 0.385 | -- | -- | -- | -- | -0.868 | -- | -- | -- | -- | -- |
| 233.18 | 0.714 | 8.56 | -- | 0.892 | -- | -- | -- | -0.918 | 8.85 | -- | -- | -- | -- |
| 181.9 | 0.628 | 8.49 | -- | -- | -1.37 | -- | -- | -0.488 | -- | 22.3 | 784 | -- | -- |
| 278.51 | 0.779 | 8.59 | -- | -- | -- | -- | -- | -0.911 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 6 | 135.69 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 10 | 135.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 107 | 137.60 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 133 | 137.97 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 175 | 138.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 275 | 140.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 297 | 140.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 304 | 140.76 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 535 | 143.56 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 594 | 144.29 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 608 | 144.49 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 648 | 144.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 813 | 146.82 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 877 | 147.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 999 | 148.44 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |