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Os01g0858200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to DEAH (Asp-Glu-Ala-His) box polypeptide 16.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.09 (0.0367) R2 : 0.689
β1 : 1.06 (0.135) R2dD : 0.0444 R2D : 0.0194
β2 : 2.32 (0.0871) R2dC : 0.481 R2C : 0.494
β3 : 1.47 (0.111) R2dE : 0.123 R2E : 0.137
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.529 (0.0784) R2dN8 : 0.0404 R2N8 : 0.00324
σ : 0.686
deviance : 216.7
__
_____
C
peak time of C : 11.6
E
wheather : radiation
threshold : 10
memory length : 731
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
204.12 0.671 9.1 1.09 2.33 1.51 -0.941 -2.32 0.526 11.7 9.99 722 -- --
213.5 0.681 9.1 1.1 2.34 1.46 -0.927 -- 0.532 11.6 9.991 723 -- --
207.56 0.671 9.1 1.06 2.32 1.5 -- -2.28 0.527 11.7 9.969 726 -- --
216.7 0.686 9.09 1.06 2.32 1.47 -- -- 0.529 11.6 10 731 -- --
346.57 0.867 9.15 0.798 -- 3.06 -- -5.19 0.497 -- 7.4 1027 -- --
232.37 0.715 9.09 1.2 2.63 -- -1.29 -- 0.429 9.94 -- -- -- --
238.82 0.724 9.09 1.15 2.64 -- -- -- 0.427 9.99 -- -- -- --
305.44 0.814 9.1 1.31 -- 3.67 -- -- 0.764 -- 2.14 1107 -- --
246.81 0.732 9.09 -- 2.28 1.72 -- -- 0.532 11.9 10 732 -- --
656.82 1.2 9.16 1.11 -- -- -- -- 0.425 -- -- -- -- --
273.46 0.774 9.12 -- 2.63 -- -- -- 0.299 9.96 -- -- -- --
350.5 0.872 9.1 -- -- 3.78 -- -- 0.678 -- 3.852 1103 -- --
689.58 1.23 9.19 -- -- -- -- -- 0.302 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 197.36 temperature 30 90 < th dose dependent rect. 5 18
2 197.69 atmosphere 1000 10 > th dose independent rect. 5 19
4 198.09 temperature 30 10 < th dose dependent sin 18 NA
5 198.51 temperature 30 90 < th dose dependent rect. 5 16
10 199.42 temperature 30 90 < th dose dependent rect. 13 10
19 200.43 temperature 30 90 < th dose dependent rect. 15 8
24 201.40 temperature 30 270 < th dose dependent rect. 3 17
32 202.21 temperature 30 270 < th dose independent rect. 14 7
33 202.39 temperature 30 270 < th dose independent rect. 3 17
41 202.96 temperature 30 10 < th dose dependent rect. 5 19
42 202.98 wind 9 720 < th dose independent sin 1 NA
43 203.00 radiation 10 720 < th dose independent rect. 19 22
49 203.15 radiation 10 720 < th dose independent rect. 8 23
54 203.29 radiation 10 720 < th dose independent rect. 3 23
59 203.38 wind 9 720 < th dose independent sin 20 NA
69 203.61 radiation 10 720 < th dose independent rect. 10 23
76 203.83 radiation 10 720 < th dose independent rect. 1 23
79 203.87 radiation 10 720 < th dose independent rect. 16 23
83 203.94 radiation 10 720 < th dose independent rect. 12 23
92 204.18 radiation 10 720 < th dose independent no NA NA
99 204.28 atmosphere 1000 10 > th dose independent sin 17 NA
100 204.33 temperature 30 90 < th dose independent rect. 5 16
115 204.49 radiation 10 720 < th dose independent rect. 3 20
121 204.59 radiation 10 720 < th dose independent rect. 6 17
127 204.67 wind 7 720 < th dose independent rect. 7 11
130 204.69 temperature 30 270 < th dose independent rect. 17 1
131 204.75 temperature 30 10 < th dose dependent rect. 12 12
140 204.82 radiation 10 720 < th dose independent rect. 8 15
146 204.93 wind 9 270 < th dose independent sin 11 NA
161 205.07 wind 7 720 < th dose independent rect. 5 14
172 205.16 humidity 60 270 > th dose independent rect. 14 7
175 205.25 radiation 10 720 < th dose independent rect. 22 23
178 205.28 humidity 70 90 > th dose independent rect. 16 7
187 205.36 temperature 20 30 > th dose dependent rect. 9 20
189 205.38 temperature 20 90 > th dose dependent rect. 23 5
204 205.54 humidity 70 270 > th dose independent rect. 15 5
207 205.55 wind 7 720 < th dose independent rect. 23 19
213 205.61 temperature 20 270 > th dose dependent rect. 23 2
242 205.83 wind 9 720 < th dose independent rect. 21 23
252 205.96 humidity 50 90 > th dose dependent rect. 16 7
259 206.00 humidity 50 270 > th dose dependent rect. 14 7
260 206.01 atmosphere 995 10 > th dose dependent rect. 5 19
261 206.03 radiation 10 720 < th dose independent sin 13 NA
262 206.03 temperature 15 270 > th dose dependent rect. 21 6
282 206.24 temperature 30 270 < th dose dependent rect. 17 1
298 206.38 radiation 10 270 < th dose independent rect. 16 1
299 206.38 atmosphere 1000 10 > th dose independent rect. 12 12
307 206.47 temperature 30 10 < th dose dependent rect. 17 7
315 206.58 atmosphere 1000 10 > th dose independent rect. 17 7
325 206.66 radiation 20 720 < th dose dependent rect. 14 19
344 206.81 wind 7 720 < th dose independent rect. 2 16
370 206.98 atmosphere 995 270 > th dose independent rect. 1 22
372 207.00 radiation 10 720 < th dose independent sin 21 NA
375 207.03 humidity 70 90 > th dose independent rect. 13 10
381 207.06 radiation 20 720 < th dose dependent rect. 14 21
395 207.18 wind 9 720 < th dose independent rect. 8 17
399 207.21 atmosphere 1000 30 < th dose independent rect. 9 18
401 207.22 humidity 70 270 > th dose independent rect. 17 1
408 207.26 radiation 10 720 < th dose independent rect. 3 14
410 207.26 temperature 15 30 > th dose dependent rect. 21 8
411 207.26 radiation 20 720 < th dose dependent rect. 14 23
416 207.28 temperature 30 90 < th dose dependent rect. 9 14
434 207.37 wind 9 720 > th dose dependent rect. 11 7
453 207.47 humidity 50 90 > th dose dependent rect. 13 10
463 207.51 wind 7 270 < th dose independent rect. 13 13
467 207.53 humidity 60 270 > th dose independent rect. 3 17
479 207.58 radiation 10 720 < th dose independent rect. 1 16
488 207.61 wind 9 720 > th dose dependent sin 21 NA
536 207.70 wind 9 720 > th dose dependent rect. 11 23
543 207.72 humidity 50 90 > th dose dependent rect. 5 18
568 207.76 humidity 60 270 > th dose dependent rect. 17 1
599 207.86 temperature 25 10 < th dose independent sin 18 NA
620 207.89 temperature 25 720 > th dose dependent rect. 15 3
624 207.92 wind 9 720 > th dose independent rect. 10 8
634 207.93 wind 9 720 > th dose independent rect. 16 23
680 207.97 wind 9 720 > th dose independent sin 23 NA
696 207.99 radiation 20 720 < th dose dependent rect. 16 21
710 208.01 wind 9 720 < th dose independent no NA NA
722 208.01 wind 9 720 > th dose dependent no NA NA
753 208.01 wind 9 720 > th dose dependent rect. 16 23
778 208.07 atmosphere 1000 10 > th dose independent rect. 14 10
790 208.08 wind 9 720 > th dose dependent rect. 14 23
807 208.14 humidity 50 90 > th dose dependent rect. 5 16
894 208.30 temperature 30 720 > th dose dependent rect. 16 19
928 208.36 wind 9 720 > th dose independent no NA NA
974 208.40 temperature 10 720 > th dose dependent rect. 14 5