Os01g0857600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0857600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 469.66 | 1.02 | 7.75 | -3.22 | 0.863 | 2.95 | 0.425 | -0.907 | -0.893 | 8.32 | 80.99 | 1381 | -- | -- |
| 468.49 | 1.01 | 7.73 | -3.13 | 0.908 | 2.94 | 0.297 | -- | -0.876 | 8.66 | 80.91 | 1333 | -- | -- |
| 467.11 | 1.01 | 7.74 | -3.2 | 0.954 | 3.03 | -- | -0.746 | -0.885 | 9.22 | 80.5 | 1309 | -- | -- |
| 467.81 | 1.01 | 7.74 | -3.13 | 0.952 | 2.97 | -- | -- | -0.881 | 9.23 | 80.87 | 1308 | -- | -- |
| 511.37 | 1.05 | 7.78 | -3.17 | -- | 2.94 | -- | -0.691 | -0.899 | -- | 82.02 | 1385 | -- | -- |
| 667.33 | 1.21 | 7.76 | -2.67 | 0.807 | -- | 2.4 | -- | -0.983 | 6.03 | -- | -- | -- | -- |
| 673.71 | 1.22 | 7.76 | -2.64 | 0.891 | -- | -- | -- | -0.987 | 7.58 | -- | -- | -- | -- |
| 512.5 | 1.05 | 7.77 | -3.09 | -- | 2.87 | -- | -- | -0.886 | -- | 82 | 1385 | -- | -- |
| 700.23 | 1.23 | 7.7 | -- | 0.901 | 2.67 | -- | -- | -0.738 | 9.16 | 94 | 1334 | -- | -- |
| 716.32 | 1.25 | 7.78 | -2.63 | -- | -- | -- | -- | -0.973 | -- | -- | -- | -- | -- |
| 857.62 | 1.37 | 7.7 | -- | 0.87 | -- | -- | -- | -0.693 | 7.79 | -- | -- | -- | -- |
| 741.29 | 1.27 | 7.74 | -- | -- | 2.55 | -- | -- | -0.768 | -- | 102.6 | 1404 | -- | -- |
| 898.61 | 1.4 | 7.72 | -- | -- | -- | -- | -- | -0.682 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 468.81 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 2 | 469.53 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 9 | 470.80 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 11 | 470.97 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 16 |
| 21 | 471.91 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 23 | 472.15 | humidity | 80 | 1440 | < th | dose dependent | rect. | 24 | 19 |
| 24 | 472.15 | humidity | 80 | 1440 | < th | dose dependent | rect. | 24 | 21 |
| 59 | 472.59 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 85 | 472.93 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 86 | 472.93 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 22 |
| 150 | 475.04 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 15 |
| 162 | 475.34 | humidity | 90 | 1440 | < th | dose dependent | sin | 0 | NA |
| 185 | 476.15 | humidity | 80 | 1440 | < th | dose dependent | sin | 21 | NA |
| 252 | 477.99 | humidity | 50 | 1440 | > th | dose dependent | sin | 0 | NA |
| 256 | 478.12 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 314 | 480.02 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 347 | 480.98 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 362 | 481.46 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 394 | 482.35 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 403 | 482.63 | humidity | 70 | 1440 | < th | dose independent | sin | 11 | NA |
| 418 | 483.06 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 450 | 483.83 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 491 | 484.71 | humidity | 70 | 1440 | > th | dose independent | sin | 11 | NA |
| 517 | 485.15 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 636 | 487.96 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 659 | 488.51 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 19 |
| 669 | 488.58 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 674 | 488.64 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 733 | 489.71 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 752 | 489.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 764 | 490.16 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 771 | 490.20 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 772 | 490.20 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 777 | 490.23 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 782 | 490.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 789 | 490.27 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 797 | 490.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 927 | 491.90 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 958 | 492.24 | humidity | 70 | 1440 | > th | dose independent | sin | 17 | NA |
| 986 | 492.60 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |