Os01g0855400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Myb-related protein B (B-Myb).
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Os01g0855400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Myb-related protein B (B-Myb).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.75 | 0.596 | 2.98 | -0.0152 | 0.0809 | 2.2 | 0.351 | 1.13 | -0.0383 | 3.78 | 9.01 | 19 | -- | -- |
| 161.04 | 0.591 | 2.98 | -0.00562 | 0.09 | 2.2 | 0.351 | -- | -0.0383 | 3.78 | 9.01 | 19 | -- | -- |
| 161.08 | 0.591 | 2.98 | -0.018 | 0.0847 | 2.16 | -- | 0.713 | -0.0392 | 3.2 | 9.054 | 18 | -- | -- |
| 161.11 | 0.591 | 2.98 | -0.0213 | 0.085 | 1.96 | -- | -- | -0.0381 | 3.13 | 9.001 | 18 | -- | -- |
| 161.49 | 0.592 | 2.98 | -0.018 | -- | 2.1 | -- | 0.743 | -0.0377 | -- | 9.064 | 18 | -- | -- |
| 168.53 | 0.609 | 2.99 | -0.13 | 0.0209 | -- | 0.645 | -- | -0.0766 | 4.19 | -- | -- | -- | -- |
| 169.7 | 0.61 | 2.99 | -0.137 | 0.0251 | -- | -- | -- | -0.0802 | 4.5 | -- | -- | -- | -- |
| 161.51 | 0.592 | 2.98 | -0.0216 | -- | 1.9 | -- | -- | -0.0372 | -- | 9.003 | 18 | -- | -- |
| 161.12 | 0.591 | 2.98 | -- | 0.0852 | 1.98 | -- | -- | -0.0354 | 3.12 | 9.01 | 18 | -- | -- |
| 169.73 | 0.609 | 2.99 | -0.136 | -- | -- | -- | -- | -0.0795 | -- | -- | -- | -- | -- |
| 170.19 | 0.61 | 2.99 | -- | 0.0226 | -- | -- | -- | -0.0649 | 4.64 | -- | -- | -- | -- |
| 161.52 | 0.592 | 2.98 | -- | -- | 1.91 | -- | -- | -0.0346 | -- | 9 | 18 | -- | -- |
| 170.22 | 0.609 | 2.99 | -- | -- | -- | -- | -- | -0.0644 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.58 | wind | 9 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 29 | 156.38 | temperature | 25 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 37 | 156.69 | wind | 9 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 43 | 156.97 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 1 |
| 45 | 157.09 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 1 |
| 77 | 157.34 | temperature | 25 | 90 | > th | dose independent | rect. | 3 | 1 |
| 79 | 157.38 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 3 | 1 |
| 86 | 157.38 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 101 | 157.51 | temperature | 25 | 10 | > th | dose independent | rect. | 3 | 1 |
| 119 | 157.58 | wind | 9 | 30 | > th | dose dependent | sin | 7 | NA |
| 150 | 157.72 | radiation | 10 | 90 | < th | dose independent | rect. | 10 | 1 |
| 162 | 158.07 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 6 |
| 176 | 158.31 | wind | 9 | 30 | > th | dose independent | rect. | 18 | 18 |
| 183 | 158.63 | radiation | 10 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 205 | 158.75 | wind | 9 | 30 | < th | dose independent | sin | 6 | NA |
| 230 | 159.12 | wind | 9 | 30 | > th | dose independent | sin | 5 | NA |
| 297 | 159.98 | temperature | 20 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 299 | 160.01 | temperature | 20 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 315 | 160.32 | radiation | 1 | 90 | < th | dose independent | rect. | 14 | 1 |
| 316 | 160.32 | radiation | 1 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 320 | 160.39 | temperature | 20 | 90 | < th | dose dependent | rect. | 14 | 2 |
| 321 | 160.41 | temperature | 20 | 90 | < th | dose independent | rect. | 14 | 2 |
| 409 | 161.05 | radiation | 10 | 10 | < th | dose independent | rect. | 12 | 1 |
| 413 | 161.09 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 4 |
| 446 | 161.40 | wind | 1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 456 | 161.44 | temperature | 25 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 485 | 161.60 | temperature | 25 | 30 | > th | dose independent | rect. | 24 | 4 |
| 507 | 161.77 | wind | 1 | 1440 | < th | dose dependent | rect. | 24 | 2 |
| 514 | 161.86 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 8 |
| 570 | 162.04 | wind | 1 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 573 | 162.07 | wind | 1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 581 | 162.09 | atmosphere | 1000 | 90 | < th | dose independent | sin | 11 | NA |
| 634 | 162.34 | atmosphere | 1000 | 90 | > th | dose independent | sin | 11 | NA |
| 677 | 162.44 | atmosphere | 1000 | 10 | < th | dose independent | sin | 10 | NA |
| 759 | 162.60 | atmosphere | 1000 | 10 | > th | dose independent | sin | 10 | NA |
| 761 | 162.60 | wind | 1 | 270 | < th | dose dependent | rect. | 20 | 1 |
| 762 | 162.60 | radiation | 30 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 781 | 162.66 | wind | 9 | 30 | > th | dose independent | no | NA | NA |
| 840 | 162.68 | wind | 9 | 30 | < th | dose independent | no | NA | NA |
| 897 | 162.81 | humidity | 90 | 720 | < th | dose independent | rect. | 4 | 1 |