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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0854800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI) (P450-dependent fatty acid omega-hydroxylase).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.33 (0.0377) R2 : 0.303
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.17 (0.0897) R2dC : 0.26 R2C : 0.249
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.416 (0.0793) R2dN8 : 0.0542 R2N8 : 0.0436
σ : 0.711
deviance : 231.08
__
_____
C
peak time of C : 11.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
205.73 0.674 4.32 -0.232 1.23 1.31 -0.809 0.961 -0.308 12.1 23.2 285 -- --
206.99 0.67 4.32 -0.177 1.19 1.2 -0.858 -- -0.3 12.1 23.04 327 -- --
208.47 0.672 4.32 -0.256 1.24 1.32 -- 1.15 -0.325 12.1 23.05 270 -- --
210.29 0.675 4.31 -0.163 1.21 1.16 -- -- -0.296 12.1 23.2 312 -- --
275.86 0.774 4.29 -0.00461 -- 1.47 -- -0.0592 -0.139 -- 27.6 829 -- --
222.73 0.7 4.34 -0.389 1.16 -- -0.908 -- -0.459 11.8 -- -- -- --
226.31 0.704 4.34 -0.426 1.16 -- -- -- -0.463 11.8 -- -- -- --
275.83 0.774 4.3 -0.0334 -- 1.47 -- -- -0.158 -- 27.7 830 -- --
210.88 0.676 4.3 -- 1.22 1.2 -- -- -0.282 12.1 23.2 312 -- --
311.32 0.824 4.37 -0.46 -- -- -- -- -0.478 -- -- -- -- --
231.08 0.711 4.33 -- 1.17 -- -- -- -0.416 11.8 -- -- -- --
275.85 0.774 4.3 -- -- 1.48 -- -- -0.152 -- 27.7 831 -- --
316.9 0.831 4.36 -- -- -- -- -- -0.427 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 194.70 humidity 80.0 270 > th dose dependent rect. 24 8
4 195.32 temperature 20.0 270 > th dose independent rect. 24 7
6 195.55 humidity 60.0 10 > th dose dependent rect. 3 8
7 195.60 humidity 70.0 90 > th dose dependent rect. 2 8
54 197.48 humidity 80.0 10 > th dose independent rect. 3 8
59 197.55 temperature 20.0 270 > th dose independent rect. 12 19
65 197.75 humidity 80.0 270 > th dose independent rect. 24 8
72 198.04 wind 3.0 14400 < th dose independent rect. 1 1
83 198.57 atmosphere 995.0 14400 > th dose independent rect. 11 3
89 198.76 wind 3.0 14400 > th dose independent rect. 1 1
95 198.98 wind 3.0 14400 < th dose dependent rect. 1 1
97 199.00 temperature 10.0 270 > th dose dependent rect. 24 7
99 199.04 wind 1.0 270 > th dose independent rect. 8 16
107 199.22 humidity 90.0 4320 > th dose dependent rect. 7 2
122 199.54 wind 1.0 14400 > th dose dependent rect. 1 1
132 199.70 wind 1.0 90 > th dose dependent rect. 22 15
136 199.80 temperature 20.0 270 > th dose independent rect. 24 19
148 200.02 wind 3.0 270 > th dose independent rect. 20 16
150 200.06 precipitation 0.1 14400 < th dose independent rect. 17 1
151 200.06 precipitation 0.1 14400 < th dose dependent rect. 17 1
170 200.29 precipitation 0.1 4320 > th dose independent rect. 7 1
171 200.29 precipitation 0.1 4320 > th dose dependent rect. 7 1
176 200.41 precipitation 0.1 14400 > th dose independent rect. 17 1
186 200.53 radiation 30.0 270 < th dose dependent rect. 24 8
189 200.57 temperature 20.0 10 > th dose independent rect. 1 9
196 200.63 precipitation 0.1 4320 < th dose independent rect. 7 1
197 200.63 precipitation 0.1 4320 < th dose dependent rect. 7 1
204 200.68 atmosphere 1000.0 90 > th dose independent rect. 2 8
211 200.84 radiation 1.0 4320 < th dose dependent rect. 7 1
218 200.91 wind 3.0 270 > th dose independent rect. 8 3
220 200.92 temperature 20.0 10 > th dose independent rect. 3 19
223 200.93 wind 1.0 30 > th dose independent rect. 22 15
238 201.01 temperature 20.0 10 > th dose independent rect. 14 17
242 201.06 atmosphere 1000.0 270 > th dose independent rect. 24 8
248 201.10 temperature 20.0 10 > th dose independent rect. 13 22
249 201.10 radiation 1.0 14400 < th dose dependent rect. 23 5
255 201.14 precipitation 0.1 14400 > th dose dependent rect. 17 1
266 201.28 temperature 10.0 270 > th dose dependent rect. 12 19
268 201.30 radiation 20.0 270 < th dose independent rect. 24 8
271 201.30 radiation 40.0 30 < th dose dependent rect. 3 8
272 201.31 atmosphere 995.0 270 > th dose independent rect. 7 17
277 201.33 temperature 20.0 10 > th dose independent rect. 1 21
286 201.41 atmosphere 1010.0 270 < th dose independent rect. 11 9
304 201.55 wind 3.0 270 > th dose independent rect. 7 5
316 201.64 wind 1.0 90 > th dose independent rect. 10 16
319 201.67 radiation 1.0 4320 > th dose independent rect. 7 1
320 201.67 radiation 1.0 4320 < th dose independent rect. 7 1
324 201.71 temperature 10.0 90 > th dose dependent rect. 13 9
329 201.75 humidity 50.0 270 > th dose independent rect. 20 16
330 201.76 wind 3.0 1440 < th dose independent rect. 2 1
332 201.77 atmosphere 1000.0 10 > th dose independent rect. 3 7
336 201.80 humidity 90.0 14400 > th dose independent rect. 7 1
337 201.80 wind 3.0 270 < th dose independent rect. 24 14
341 201.81 wind 1.0 10 > th dose independent rect. 10 17
346 201.86 precipitation 0.1 90 < th dose independent rect. 21 16
348 201.86 precipitation 0.1 90 < th dose dependent rect. 21 16
362 201.95 wind 1.0 270 > th dose dependent rect. 8 3
368 202.00 temperature 20.0 10 > th dose independent rect. 3 7
373 202.03 temperature 10.0 270 > th dose independent rect. 12 8
375 202.03 temperature 10.0 270 > th dose independent rect. 20 16
376 202.03 atmosphere 995.0 270 > th dose independent rect. 20 16
389 202.10 wind 9.0 90 < th dose dependent rect. 2 8
391 202.12 wind 9.0 270 < th dose independent rect. 12 8
399 202.15 temperature 10.0 10 > th dose dependent rect. 13 9
404 202.18 wind 1.0 90 > th dose dependent rect. 7 6
406 202.19 humidity 80.0 14400 > th dose dependent rect. 13 1
448 202.35 humidity 90.0 90 < th dose independent rect. 21 16
453 202.38 precipitation 0.1 10 < th dose independent rect. 22 15
454 202.38 precipitation 0.1 10 < th dose dependent rect. 22 15
472 202.45 precipitation 0.1 4320 > th dose independent rect. 4 4
476 202.47 wind 1.0 90 > th dose dependent rect. 5 8
477 202.48 wind 3.0 14400 < th dose independent rect. 23 4
478 202.48 precipitation 0.1 4320 > th dose dependent rect. 4 4
485 202.53 wind 9.0 270 < th dose dependent rect. 24 8
487 202.55 precipitation 0.1 270 < th dose independent rect. 12 8
488 202.55 precipitation 0.1 270 < th dose dependent rect. 12 8
549 202.78 temperature 10.0 270 > th dose independent rect. 24 7
551 202.78 temperature 30.0 270 < th dose independent rect. 24 7
552 202.78 humidity 50.0 270 > th dose independent rect. 24 7
555 202.78 atmosphere 1015.0 270 < th dose independent rect. 24 7
558 202.78 temperature 10.0 270 > th dose independent rect. 7 17
562 202.79 wind 9.0 270 < th dose independent rect. 24 7
576 202.82 precipitation 0.1 4320 > th dose dependent rect. 3 8
582 202.85 wind 3.0 90 < th dose independent rect. 2 9
601 202.91 precipitation 0.1 4320 < th dose independent rect. 3 6
603 202.91 precipitation 0.1 4320 < th dose dependent rect. 3 6
604 202.92 atmosphere 1005.0 14400 < th dose independent rect. 23 1
605 202.92 precipitation 0.1 10 < th dose independent rect. 13 9
608 202.92 precipitation 0.1 10 < th dose dependent rect. 13 9
620 202.95 precipitation 0.1 270 < th dose independent rect. 7 17
623 202.95 precipitation 0.1 270 < th dose dependent rect. 7 17
624 202.96 atmosphere 1005.0 14400 > th dose independent rect. 23 1
638 202.97 wind 9.0 270 < th dose independent rect. 20 16
645 202.98 humidity 80.0 270 > th dose dependent rect. 3 1
649 202.99 wind 9.0 270 < th dose dependent rect. 1 14
651 203.00 temperature 10.0 270 > th dose dependent rect. 24 20
676 203.08 wind 9.0 10 < th dose independent rect. 13 9
685 203.12 wind 3.0 14400 > th dose independent rect. 23 4
686 203.12 precipitation 0.1 4320 < th dose independent rect. 3 10
690 203.12 precipitation 0.1 4320 < th dose dependent rect. 3 10
697 203.13 wind 3.0 270 < th dose dependent rect. 24 14
705 203.15 humidity 80.0 270 > th dose dependent sin 8 NA
732 203.19 wind 9.0 270 < th dose dependent rect. 24 18
772 203.28 temperature 10.0 10 > th dose independent rect. 13 9
774 203.28 atmosphere 1010.0 10 < th dose independent rect. 13 9
776 203.28 wind 3.0 270 < th dose independent rect. 24 11
777 203.28 temperature 10.0 10 > th dose independent rect. 22 15
778 203.28 atmosphere 995.0 10 > th dose independent rect. 22 15
785 203.31 precipitation 0.1 270 < th dose independent rect. 24 7
788 203.31 precipitation 0.1 270 < th dose dependent rect. 24 7
796 203.33 atmosphere 995.0 90 > th dose independent rect. 10 16
826 203.40 humidity 80.0 30 > th dose dependent sin 5 NA
834 203.42 radiation 20.0 30 < th dose independent rect. 3 7
842 203.44 wind 3.0 1440 > th dose independent rect. 2 1
861 203.47 temperature 15.0 10 > th dose dependent rect. 13 18
873 203.50 humidity 80.0 30 > th dose dependent rect. 3 11
898 203.56 wind 3.0 14400 < th dose independent rect. 22 9
899 203.56 radiation 40.0 10 < th dose independent rect. 13 9
951 203.70 wind 1.0 270 > th dose independent rect. 12 8
954 203.70 wind 1.0 1440 > th dose dependent rect. 2 1
959 203.72 humidity 80.0 10 > th dose independent rect. 3 11