Os01g0853000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0853000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 381.34 | 0.917 | 9.48 | -3.24 | 2.02 | 2.91 | 1.21 | -10.9 | -1.33 | 16.2 | 26.65 | 293 | -- | -- |
| 396.61 | 0.928 | 9.35 | -2.18 | 2.17 | 1.84 | 0.271 | -- | -1.13 | 15.9 | 26.33 | 437 | -- | -- |
| 384.69 | 0.913 | 9.46 | -3.11 | 2.04 | 2.91 | -- | -10.1 | -1.28 | 16.2 | 26.9 | 300 | -- | -- |
| 396.84 | 0.928 | 9.35 | -2.17 | 2.16 | 1.86 | -- | -- | -1.13 | 15.9 | 26.3 | 437 | -- | -- |
| 518.52 | 1.06 | 9.53 | -3.64 | -- | 4.28 | -- | -9.97 | -1.61 | -- | 25.59 | 271 | -- | -- |
| 456.09 | 1 | 9.36 | -1.88 | 2.88 | -- | 0.961 | -- | -1.08 | 16.4 | -- | -- | -- | -- |
| 458.6 | 1 | 9.35 | -1.87 | 2.88 | -- | -- | -- | -1.07 | 16.4 | -- | -- | -- | -- |
| 548.03 | 1.09 | 9.4 | -2.53 | -- | 3.59 | -- | -- | -1.43 | -- | 24.89 | 269 | -- | -- |
| 514.92 | 1.06 | 9.29 | -- | 2.42 | 1.39 | -- | -- | -0.85 | 16.1 | 27.1 | 439 | -- | -- |
| 904.42 | 1.41 | 9.33 | -1.98 | -- | -- | -- | -- | -1.15 | -- | -- | -- | -- | -- |
| 550.8 | 1.1 | 9.31 | -- | 2.92 | -- | -- | -- | -0.867 | 16.4 | -- | -- | -- | -- |
| 712.28 | 1.24 | 9.32 | -- | -- | 3.27 | -- | -- | -1.08 | -- | 25.1 | 264 | -- | -- |
| 1008.19 | 1.48 | 9.28 | -- | -- | -- | -- | -- | -0.931 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 368.23 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 369.14 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 4 | 370.57 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 7 | 372.38 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 9 | 372.82 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 16 | 373.43 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 112 | 379.71 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 137 | 380.21 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 13 |
| 138 | 380.23 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 156 | 380.30 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 196 | 381.09 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 224 | 381.52 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 4 |
| 227 | 381.56 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 240 | 381.71 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 242 | 381.74 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 343 | 382.78 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 365 | 383.03 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 367 | 383.03 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 374 | 383.05 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 393 | 383.34 | humidity | 60.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 423 | 383.60 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 435 | 383.69 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 456 | 383.80 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 485 | 384.00 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 505 | 384.15 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 522 | 384.34 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 539 | 384.53 | humidity | 80.0 | 14400 | > th | dose independent | sin | 21 | NA |
| 567 | 384.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 569 | 384.70 | humidity | 80.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 588 | 384.86 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 589 | 384.86 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 595 | 384.88 | temperature | 25.0 | 270 | > th | dose dependent | sin | 22 | NA |
| 617 | 385.11 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 629 | 385.21 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 656 | 385.38 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 661 | 385.42 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 663 | 385.42 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 681 | 385.58 | wind | 3.0 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 700 | 385.69 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 10 | 8 |
| 710 | 385.75 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 4 |
| 715 | 385.76 | wind | 3.0 | 43200 | > th | dose independent | rect. | 18 | 16 |
| 755 | 385.94 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 764 | 386.01 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 787 | 386.14 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 14 |
| 801 | 386.20 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 814 | 386.26 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 826 | 386.34 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 9 |
| 869 | 386.51 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 13 | 13 |
| 872 | 386.52 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 13 | 15 |
| 878 | 386.53 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 916 | 386.71 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 917 | 386.71 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 918 | 386.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 919 | 386.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 921 | 386.74 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 932 | 386.79 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 943 | 386.82 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 945 | 386.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 954 | 386.85 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 965 | 386.90 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 19 | 15 |