Os01g0852000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0852000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.14 | 0.309 | 9.01 | -0.506 | 0.197 | 1.1 | -0.498 | 4.13 | -0.44 | 17.2 | 0.5788 | 1476 | -- | -- |
| 46.38 | 0.317 | 8.94 | -0.0993 | 0.455 | 0.67 | -0.46 | -- | -0.308 | 16.8 | 3.286 | 3296 | -- | -- |
| 43.73 | 0.308 | 9.01 | -0.51 | 0.196 | 1.1 | -- | 4.15 | -0.442 | 17.5 | 0.55 | 1476 | -- | -- |
| 47.21 | 0.32 | 8.94 | -0.0839 | 0.451 | 0.673 | -- | -- | -0.312 | 16.7 | 3.288 | 3288 | -- | -- |
| 45.63 | 0.315 | 9.01 | -0.53 | -- | 1.15 | -- | 4.29 | -0.448 | -- | 0.5147 | 1467 | -- | -- |
| 50.41 | 0.333 | 8.95 | -0.17 | 0.205 | -- | -0.456 | -- | -0.407 | 17.6 | -- | -- | -- | -- |
| 50.63 | 0.333 | 8.96 | -0.17 | 0.214 | -- | -- | -- | -0.41 | 18.9 | -- | -- | -- | -- |
| 48.02 | 0.323 | 8.9 | -0.241 | -- | 0.519 | -- | -- | -0.212 | -- | 13.38 | 8710 | -- | -- |
| 47.38 | 0.321 | 8.93 | -- | 0.48 | 0.753 | -- | -- | -0.292 | 16.6 | 3.1 | 3281 | -- | -- |
| 53.04 | 0.34 | 8.95 | -0.174 | -- | -- | -- | -- | -0.414 | -- | -- | -- | -- | -- |
| 51.39 | 0.335 | 8.95 | -- | 0.216 | -- | -- | -- | -0.391 | 18.8 | -- | -- | -- | -- |
| 45.96 | 0.316 | 8.9 | -- | -- | 0.495 | -- | -- | -0.157 | -- | 4.682 | 17330 | -- | -- |
| 53.84 | 0.342 | 8.95 | -- | -- | -- | -- | -- | -0.395 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.48 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 6 | 41.20 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 9 | 41.48 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 12 | 41.51 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 14 | 41.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 15 | 41.52 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 17 | 41.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 18 | 41.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 19 | 41.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 33 | 41.56 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 61 | 41.59 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 9 |
| 67 | 41.60 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 81 | 41.62 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 86 | 41.63 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 88 | 41.63 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 101 | 41.64 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 234 | 41.77 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 235 | 41.77 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 256 | 41.78 | temperature | 25.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 259 | 41.78 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 12 |
| 261 | 41.78 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 1 | 15 |
| 278 | 41.79 | temperature | 25.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 279 | 41.79 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 280 | 41.79 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 290 | 41.79 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 305 | 41.80 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 361 | 41.82 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 379 | 41.82 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 13 |
| 400 | 41.83 | wind | 1.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 441 | 41.84 | temperature | 20.0 | 14400 | > th | dose dependent | no | NA | NA |
| 503 | 41.85 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 550 | 41.87 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 633 | 41.89 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 661 | 41.90 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 679 | 41.90 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 11 |
| 758 | 41.92 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 768 | 41.92 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 18 | 19 |
| 882 | 41.95 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 2 | NA |