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Os01g0848900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0292) R2 : 0.8
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.44 (0.0689) R2dC : 0.555 R2C : 0.571
β3 : -1.9 (0.0851) R2dE : 0.262 R2E : 0.211
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.406 (0.0657) R2dN8 : 0.0258 R2N8 : -0.0414
σ : 0.537
deviance : 132.86
__
_____
C
peak time of C : 10.5
E
wheather : temperature
threshold : 14
memory length : 47520
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.06 0.519 11.2 -1.66 2.15 -1.18 0.577 1.72 -0.221 10.9 24 795 -- --
123.94 0.519 11.2 -1.91 2.17 -1.1 0.457 -- -0.198 10.9 23.03 787 -- --
123.26 0.517 11.2 -1.75 2.17 -1.12 -- 1.08 -0.247 10.8 24 807 -- --
123.67 0.518 11.2 -1.96 2.16 -1.05 -- -- -0.299 10.8 23.79 809 -- --
358.24 0.882 11.2 -1.03 -- -2.64 -- 3.74 -0.135 -- 24.15 818 -- --
145.76 0.566 11.3 -2.25 2.48 -- 0.632 -- -0.433 10.5 -- -- -- --
147.4 0.569 11.3 -2.22 2.48 -- -- -- -0.431 10.6 -- -- -- --
365.35 0.89 11.3 -1.66 -- -2.36 -- -- -0.174 -- 24.1 828 -- --
132.86 0.537 11.1 -- 2.44 -1.9 -- -- 0.406 10.5 14 47520 -- --
524.65 1.07 11.3 -2.27 -- -- -- -- -0.443 -- -- -- -- --
277.87 0.78 11.2 -- 2.49 -- -- -- -0.183 10.6 -- -- -- --
435.84 0.972 11.2 -- -- -2.72 -- -- 0.066 -- 23.9 843 -- --
660.55 1.2 11.3 -- -- -- -- -- -0.191 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 110.44 radiation 1 720 > th dose independent rect. 17 2
12 111.88 humidity 70 720 < th dose independent rect. 17 18
13 112.65 radiation 1 720 > th dose independent rect. 8 11
26 113.90 radiation 1 720 < th dose independent rect. 13 12
40 114.21 radiation 1 720 < th dose dependent rect. 15 10
43 114.42 radiation 1 720 < th dose independent rect. 11 14
49 114.75 humidity 70 720 < th dose independent sin 11 NA
61 114.84 temperature 10 720 > th dose dependent rect. 17 2
67 115.22 humidity 70 720 > th dose independent sin 11 NA
68 115.26 humidity 70 720 > th dose independent rect. 19 6
72 115.36 radiation 1 720 < th dose dependent rect. 11 14
73 115.43 humidity 90 720 < th dose dependent rect. 17 2
76 115.48 wind 7 720 < th dose independent rect. 17 2
80 115.66 temperature 25 720 > th dose dependent rect. 17 18
83 115.77 humidity 70 720 > th dose independent rect. 19 14
90 116.15 humidity 80 720 < th dose dependent rect. 17 18
99 116.44 temperature 25 720 > th dose dependent rect. 17 2
104 116.74 humidity 70 720 > th dose independent rect. 5 19
114 117.19 temperature 25 720 > th dose independent rect. 17 2
139 118.13 radiation 40 720 < th dose independent rect. 14 9
143 118.29 humidity 70 720 < th dose independent rect. 17 2
144 118.30 radiation 1 720 > th dose dependent rect. 17 1
155 118.64 radiation 40 720 < th dose independent rect. 14 17
160 118.67 humidity 70 720 > th dose independent rect. 19 4
163 118.74 radiation 1 720 < th dose dependent rect. 5 19
169 118.81 wind 1 43200 < th dose independent rect. 20 8
171 118.82 radiation 40 43200 < th dose dependent rect. 21 8
177 118.89 wind 1 43200 < th dose independent rect. 18 10
197 119.06 wind 7 43200 < th dose independent rect. 12 2
198 119.07 wind 7 43200 > th dose independent rect. 12 2
235 119.45 radiation 40 43200 < th dose dependent rect. 24 5
255 119.79 wind 1 43200 > th dose independent rect. 18 11
265 119.87 humidity 70 720 > th dose independent rect. 14 18
266 119.87 radiation 40 43200 < th dose dependent rect. 19 10
276 120.04 temperature 10 720 > th dose dependent rect. 8 12
293 120.11 radiation 10 30 < th dose dependent rect. 2 19
294 120.13 wind 9 720 < th dose independent rect. 7 22
303 120.21 wind 9 14400 > th dose independent rect. 16 1
307 120.25 wind 1 43200 > th dose independent rect. 22 6
309 120.25 radiation 20 10 < th dose dependent rect. 3 17
321 120.36 wind 1 43200 > th dose independent rect. 20 8
327 120.39 wind 1 43200 < th dose dependent rect. 18 11
329 120.42 wind 7 270 < th dose independent rect. 15 13
334 120.45 wind 1 43200 < th dose dependent rect. 23 5
346 120.54 wind 9 720 < th dose independent rect. 9 10
353 120.59 humidity 70 720 > th dose independent rect. 14 20
359 120.65 wind 7 43200 > th dose dependent rect. 12 4
362 120.67 radiation 1 720 < th dose independent rect. 5 19
364 120.70 wind 9 720 < th dose independent rect. 7 14
367 120.73 radiation 40 720 < th dose dependent rect. 14 10
375 120.78 humidity 70 720 > th dose independent rect. 14 10
413 120.89 wind 1 43200 > th dose independent rect. 3 1
415 120.90 radiation 10 43200 < th dose dependent rect. 3 2
417 120.90 temperature 30 270 < th dose dependent rect. 4 21
430 120.99 wind 7 43200 > th dose dependent rect. 14 2
434 121.00 wind 1 43200 < th dose dependent rect. 20 9
438 121.03 wind 9 720 < th dose independent rect. 1 18
458 121.13 temperature 25 720 > th dose dependent sin 10 NA
462 121.16 radiation 40 4320 < th dose dependent rect. 18 10
472 121.23 radiation 40 4320 < th dose dependent rect. 18 8
487 121.32 radiation 1 43200 > th dose dependent rect. 18 1
500 121.33 humidity 50 720 > th dose dependent rect. 5 19
513 121.40 radiation 40 43200 < th dose dependent rect. 18 12
514 121.41 humidity 90 4320 < th dose independent rect. 6 1
517 121.42 radiation 10 43200 < th dose dependent rect. 18 12
539 121.53 temperature 25 720 > th dose independent rect. 8 12
553 121.63 humidity 70 720 < th dose dependent sin 10 NA
557 121.64 temperature 25 720 < th dose independent rect. 5 19
565 121.68 radiation 10 10 < th dose dependent sin 0 NA
578 121.72 radiation 1 720 > th dose independent sin 18 NA
595 121.80 humidity 60 14400 > th dose independent rect. 3 4
602 121.83 radiation 1 43200 < th dose independent rect. 21 8
606 121.84 wind 1 4320 > th dose dependent rect. 18 2
608 121.85 humidity 60 270 > th dose dependent rect. 17 7
612 121.88 radiation 1 90 > th dose independent sin 5 NA
613 121.88 radiation 1 43200 < th dose independent rect. 24 5
621 121.91 temperature 25 720 > th dose independent rect. 7 18
623 121.91 temperature 10 720 > th dose dependent rect. 9 2
626 121.93 radiation 10 43200 < th dose independent rect. 17 12
631 121.96 radiation 1 43200 < th dose independent rect. 19 10
639 122.01 temperature 15 14400 > th dose independent rect. 9 2
640 122.02 radiation 10 43200 < th dose independent rect. 17 3
641 122.02 radiation 10 43200 < th dose independent rect. 17 5
644 122.02 radiation 10 43200 < th dose independent rect. 17 8
655 122.03 wind 1 43200 < th dose dependent sin 13 NA
659 122.05 radiation 10 10 < th dose independent rect. 3 17
663 122.06 wind 9 4320 < th dose dependent rect. 18 2
683 122.15 temperature 10 270 > th dose dependent rect. 7 22
704 122.18 radiation 1 43200 < th dose independent rect. 3 2
705 122.18 wind 7 90 < th dose independent rect. 17 12
710 122.22 humidity 80 14400 > th dose dependent rect. 4 2
719 122.25 humidity 70 720 > th dose independent rect. 9 15
724 122.28 temperature 15 14400 < th dose independent rect. 9 2
735 122.31 temperature 25 720 > th dose dependent rect. 8 21
741 122.32 temperature 25 720 > th dose dependent rect. 8 19
743 122.33 humidity 70 1440 > th dose independent rect. 9 1
745 122.33 wind 1 43200 < th dose dependent rect. 7 1
757 122.35 radiation 1 43200 > th dose independent rect. 4 1
768 122.35 radiation 1 43200 > th dose dependent rect. 4 1
816 122.42 humidity 70 720 > th dose independent rect. 17 22
830 122.44 humidity 80 270 > th dose independent rect. 21 1
841 122.46 radiation 20 14400 > th dose dependent rect. 16 1
847 122.47 temperature 20 14400 > th dose independent rect. 4 1
857 122.48 radiation 10 4320 < th dose dependent rect. 18 1
868 122.49 temperature 10 720 > th dose dependent rect. 8 20
869 122.49 temperature 10 270 > th dose dependent rect. 23 21
903 122.54 humidity 80 14400 > th dose dependent rect. 3 4
905 122.54 temperature 10 90 > th dose dependent rect. 17 12
909 122.55 humidity 70 270 > th dose dependent rect. 5 19
920 122.57 temperature 25 720 > th dose dependent rect. 16 9
932 122.60 humidity 50 14400 > th dose dependent rect. 3 4
940 122.62 temperature 20 14400 < th dose independent rect. 4 1
941 122.62 radiation 40 720 < th dose independent rect. 14 1
945 122.62 humidity 70 270 > th dose dependent rect. 4 21
984 122.71 temperature 25 720 > th dose independent rect. 16 20
1000 122.76 temperature 20 14400 > th dose dependent rect. 2 1