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Os01g0847100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0516) R2 : 0.808
β1 : 0.378 (0.243) R2dD : 0.00238 R2D : 0.0242
β2 : 3.33 (0.105) R2dC : 0.428 R2C : 0.453
β3 : 1.97 (0.167) R2dE : 0.0953 R2E : 0.246
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -4.07 (0.601) R2dD*E : 0.0518 R2D*E : 0.16
γ1 : 0.919 (0.114) R2dN8 : 0.0537 R2N8 : 0.0992
σ : 0.827
deviance : 314.96
__
_____
C
peak time of C : 23.5
E
wheather : temperature
threshold : 21.57
memory length : 2904
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
315.35 0.834 10.8 0.439 3.32 1.98 0.126 -3.99 0.946 23.5 21.49 2819 -- --
342.68 0.862 10.6 1.23 3.28 2.5 -0.0331 -- 1.14 23.6 21.2 3523 -- --
314.96 0.827 10.8 0.378 3.33 1.97 -- -4.07 0.919 23.5 21.57 2904 -- --
337.61 0.856 10.6 0.976 3.34 3.12 -- -- 1.2 23.6 19.44 3447 -- --
900.24 1.4 10.8 0.65 -- 2.8 -- -3.44 0.779 -- 21.7 895 -- --
487.61 1.04 10.5 2.67 3.4 -- -0.0549 -- 1.92 23.6 -- -- -- --
487.62 1.03 10.5 2.68 3.4 -- -- -- 1.92 23.6 -- -- -- --
906.37 1.4 10.6 1.68 -- 2.85 -- -- 1.11 -- 21.64 871 -- --
323.1 0.837 10.6 -- 3.31 3.64 -- -- 1.09 23.5 18.6 9900 -- --
1215.76 1.63 10.4 2.77 -- -- -- -- 1.96 -- -- -- -- --
676.28 1.22 10.5 -- 3.43 -- -- -- 1.62 23.6 -- -- -- --
970.19 1.45 10.6 -- -- 3.36 -- -- 0.837 -- 21.44 890 -- --
1418.06 1.76 10.4 -- -- -- -- -- 1.65 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 302.76 wind 3 43200 < th dose dependent rect. 20 3
4 307.69 wind 3 43200 > th dose independent rect. 20 2
5 307.79 wind 3 43200 < th dose independent rect. 20 2
10 309.38 temperature 25 1440 < th dose dependent rect. 21 2
12 309.74 temperature 25 1440 < th dose dependent rect. 19 5
16 310.15 humidity 90 14400 > th dose dependent rect. 2 13
38 312.26 radiation 1 14400 < th dose independent rect. 6 9
39 312.38 radiation 1 14400 > th dose independent rect. 6 9
52 313.25 temperature 10 1440 > th dose dependent rect. 19 4
60 313.58 radiation 1 14400 < th dose independent rect. 9 4
80 314.40 temperature 25 1440 < th dose dependent rect. 18 11
81 314.41 humidity 90 14400 > th dose dependent rect. 5 1
84 314.49 radiation 1 14400 > th dose independent rect. 9 4
146 316.17 radiation 1 14400 < th dose dependent rect. 6 9
157 316.60 humidity 90 14400 > th dose dependent sin 4 NA
166 316.73 temperature 10 1440 > th dose dependent rect. 18 11
199 317.44 temperature 15 720 > th dose dependent rect. 16 18
227 318.04 humidity 60 43200 > th dose independent rect. 19 16
229 318.08 wind 1 43200 < th dose independent rect. 23 3
231 318.12 humidity 60 43200 < th dose independent rect. 19 16
238 318.27 temperature 20 4320 > th dose independent rect. 18 6
241 318.30 temperature 25 1440 < th dose dependent sin 12 NA
248 318.40 wind 1 43200 < th dose dependent rect. 8 21
251 318.43 temperature 20 4320 > th dose independent rect. 19 4
254 318.47 radiation 1 14400 < th dose dependent rect. 10 2
265 318.62 humidity 60 43200 > th dose independent rect. 19 2
277 318.83 temperature 10 1440 > th dose dependent rect. 4 1
306 319.26 radiation 1 14400 > th dose independent rect. 18 21
320 319.37 radiation 1 14400 < th dose dependent rect. 22 18
349 319.64 temperature 20 14400 < th dose independent rect. 21 1
360 319.74 temperature 25 1440 < th dose dependent rect. 4 1
361 319.74 humidity 90 14400 > th dose dependent rect. 4 3
372 319.84 wind 1 43200 > th dose independent rect. 23 3
375 319.85 humidity 90 43200 < th dose dependent rect. 19 1
385 320.12 radiation 1 14400 < th dose dependent rect. 6 1
387 320.16 temperature 20 4320 < th dose independent rect. 18 6
388 320.17 temperature 25 4320 < th dose independent rect. 11 1
403 320.40 wind 1 43200 < th dose dependent rect. 10 19
414 320.56 temperature 25 4320 > th dose independent rect. 11 1
446 320.93 temperature 20 14400 > th dose independent rect. 21 1
447 320.93 wind 3 43200 < th dose independent rect. 9 3
449 320.96 humidity 60 43200 < th dose independent rect. 19 2
475 321.21 radiation 1 14400 < th dose dependent sin 4 NA
483 321.26 temperature 10 1440 > th dose dependent sin 12 NA
505 321.42 radiation 1 14400 < th dose independent rect. 18 21
516 321.51 humidity 60 43200 < th dose dependent rect. 18 17
519 321.53 wind 3 43200 > th dose independent rect. 9 3
528 321.59 humidity 70 43200 < th dose dependent rect. 19 15
531 321.62 temperature 20 4320 > th dose independent rect. 16 13
552 321.74 humidity 70 43200 < th dose independent rect. 16 7
559 321.78 temperature 20 4320 > th dose independent rect. 16 15
577 321.93 humidity 60 43200 < th dose dependent rect. 19 1
598 322.10 humidity 50 43200 > th dose dependent rect. 19 1
609 322.16 radiation 1 14400 < th dose independent rect. 22 17
650 322.35 wind 1 43200 < th dose dependent rect. 24 2
656 322.40 humidity 70 43200 < th dose independent rect. 17 5
659 322.41 temperature 20 4320 < th dose independent rect. 17 10
688 322.56 temperature 20 4320 < th dose independent rect. 16 15
705 322.66 humidity 80 43200 < th dose dependent rect. 17 4
711 322.74 radiation 1 14400 > th dose independent rect. 6 3
713 322.75 radiation 1 14400 < th dose independent rect. 6 3
726 322.82 temperature 20 4320 > th dose independent sin 14 NA
735 322.86 humidity 60 43200 < th dose dependent sin 9 NA
754 322.98 atmosphere 1010 43200 > th dose dependent rect. 3 1
757 323.00 radiation 1 43200 < th dose independent rect. 18 11
796 323.15 radiation 1 43200 > th dose independent rect. 18 11
801 323.18 humidity 60 43200 > th dose independent rect. 16 9
806 323.20 humidity 60 43200 > th dose independent rect. 16 11
827 323.31 humidity 60 43200 < th dose dependent rect. 8 3
829 323.32 humidity 60 43200 < th dose independent sin 9 NA
838 323.35 wind 3 43200 > th dose independent rect. 11 1
866 323.49 wind 3 43200 > th dose independent rect. 9 1
895 323.60 wind 3 43200 < th dose independent rect. 11 1
921 323.64 humidity 60 43200 < th dose independent rect. 16 11
981 323.82 radiation 1 14400 < th dose dependent rect. 9 4