Os01g0845000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF668 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0845000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF668 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.82 | 0.6 | 3.52 | 0.865 | 0.332 | 0.735 | 1.89 | 1.39 | 0.442 | 17 | 69.61 | 8 | -- | -- |
| 167.03 | 0.607 | 3.52 | 0.945 | 0.259 | 0.65 | 1.41 | -- | 0.449 | 18.7 | 69.61 | 8 | -- | -- |
| 169.93 | 0.612 | 3.52 | 0.894 | 0.303 | 0.691 | -- | 0.689 | 0.454 | 17.5 | 70 | 7 | -- | -- |
| 171.74 | 0.614 | 3.52 | 0.923 | 0.311 | 0.722 | -- | -- | 0.463 | 17.4 | 70 | 7 | -- | -- |
| 173.36 | 0.617 | 3.52 | 0.889 | -- | 0.544 | -- | 0.708 | 0.435 | -- | 70 | 7 | -- | -- |
| 182.95 | 0.634 | 3.54 | 0.955 | 0.416 | -- | 0.626 | -- | 0.393 | 23.6 | -- | -- | -- | -- |
| 184.28 | 0.636 | 3.54 | 0.927 | 0.42 | -- | -- | -- | 0.388 | 0.381 | -- | -- | -- | -- |
| 175.28 | 0.619 | 3.52 | 0.919 | -- | 0.568 | -- | -- | 0.442 | -- | 69.65 | 7 | -- | -- |
| 194.06 | 0.649 | 3.54 | -- | 0.301 | 0.714 | -- | -- | 0.368 | 17.7 | 73 | 8 | -- | -- |
| 195.36 | 0.653 | 3.53 | 0.941 | -- | -- | -- | -- | 0.395 | -- | -- | -- | -- | -- |
| 206.93 | 0.673 | 3.56 | -- | 0.433 | -- | -- | -- | 0.285 | 0.491 | -- | -- | -- | -- |
| 197.4 | 0.657 | 3.54 | -- | -- | 0.578 | -- | -- | 0.351 | -- | 73 | 8 | -- | -- |
| 218.73 | 0.69 | 3.55 | -- | -- | -- | -- | -- | 0.291 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.07 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 15 | 16 |
| 6 | 161.93 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 9 | 162.16 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 17 |
| 12 | 162.19 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 21 | 162.38 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 14 | 22 |
| 27 | 162.52 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 11 | 19 |
| 38 | 162.64 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 39 | 162.66 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 51 | 162.80 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 62 | 162.97 | humidity | 70.0 | 10 | > th | dose dependent | no | NA | NA |
| 70 | 163.06 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 75 | 163.09 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 17 | 21 |
| 87 | 163.18 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 123 | 163.46 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 159 | 163.77 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 167 | 163.83 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 18 | 20 |
| 221 | 164.15 | humidity | 90.0 | 90 | < th | dose independent | rect. | 7 | 17 |
| 248 | 164.39 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 254 | 164.42 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 17 | 21 |
| 260 | 164.46 | humidity | 80.0 | 90 | > th | dose independent | rect. | 15 | 16 |
| 282 | 164.66 | humidity | 80.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 284 | 164.67 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 291 | 164.70 | humidity | 90.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 303 | 164.78 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 327 | 164.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 23 |
| 329 | 164.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 330 | 164.95 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 15 |
| 336 | 164.99 | humidity | 80.0 | 90 | < th | dose independent | rect. | 17 | 21 |
| 356 | 165.11 | precipitation | 0.1 | 90 | < th | dose independent | sin | 0 | NA |
| 357 | 165.11 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 0 | NA |
| 389 | 165.22 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 392 | 165.23 | temperature | 25.0 | 90 | > th | dose independent | rect. | 5 | 17 |
| 403 | 165.28 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 22 |
| 425 | 165.35 | temperature | 25.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 434 | 165.39 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 15 |
| 471 | 165.50 | humidity | 50.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 478 | 165.52 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 15 |
| 494 | 165.59 | humidity | 80.0 | 30 | > th | dose independent | rect. | 24 | 20 |
| 503 | 165.63 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 517 | 165.68 | humidity | 80.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 521 | 165.69 | humidity | 80.0 | 90 | > th | dose independent | rect. | 12 | 21 |
| 525 | 165.71 | humidity | 80.0 | 30 | < th | dose independent | rect. | 19 | 19 |
| 552 | 165.78 | precipitation | 0.1 | 90 | > th | dose independent | sin | 0 | NA |
| 561 | 165.81 | humidity | 80.0 | 30 | > th | dose independent | rect. | 24 | 23 |
| 574 | 165.84 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 5 |
| 587 | 165.88 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 655 | 166.02 | temperature | 25.0 | 90 | > th | dose independent | rect. | 5 | 8 |
| 735 | 166.21 | humidity | 80.0 | 90 | > th | dose independent | rect. | 12 | 23 |
| 795 | 166.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 23 |
| 799 | 166.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 803 | 166.35 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 20 |
| 833 | 166.42 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 9 |
| 917 | 166.57 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 993 | 166.74 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 1 | NA |