Os01g0841200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF246, plant family protein.
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Os01g0841200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF246, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.22 | 0.449 | 6.45 | 0.0699 | 0.728 | 1.36 | -0.615 | -2.01 | -0.309 | 7.81 | 24.6 | 14 | -- | -- |
| 92.64 | 0.448 | 6.42 | 0.299 | 0.752 | 1.22 | -0.587 | -- | -0.264 | 7.78 | 23.68 | 12 | -- | -- |
| 92.27 | 0.447 | 6.45 | 0.0412 | 0.731 | 1.4 | -- | -2.07 | -0.314 | 7.69 | 24.6 | 12 | -- | -- |
| 93.74 | 0.451 | 6.43 | 0.275 | 0.724 | 1.22 | -- | -- | -0.279 | 7.83 | 23.7 | 12 | -- | -- |
| 120.26 | 0.514 | 6.46 | 0.0835 | -- | 1.25 | -- | -2.05 | -0.283 | -- | 24.6 | 12 | -- | -- |
| 115.12 | 0.503 | 6.39 | 0.515 | 0.755 | -- | -0.658 | -- | -0.114 | 10.3 | -- | -- | -- | -- |
| 116.86 | 0.506 | 6.39 | 0.489 | 0.758 | -- | -- | -- | -0.116 | 10.4 | -- | -- | -- | -- |
| 120.25 | 0.511 | 6.45 | 0.265 | -- | 1.14 | -- | -- | -0.295 | -- | 21.9 | 2 | -- | -- |
| 95.55 | 0.455 | 6.44 | -- | 0.728 | 1.29 | -- | -- | -0.329 | 7.67 | 23.32 | 12 | -- | -- |
| 151.94 | 0.576 | 6.41 | 0.477 | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
| 123.17 | 0.519 | 6.41 | -- | 0.755 | -- | -- | -- | -0.17 | 10.3 | -- | -- | -- | -- |
| 122.05 | 0.515 | 6.46 | -- | -- | 1.19 | -- | -- | -0.332 | -- | 21.7 | 2 | -- | -- |
| 157.94 | 0.587 | 6.43 | -- | -- | -- | -- | -- | -0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.05 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 13 |
| 4 | 90.38 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 12 | 91.09 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 14 | 91.16 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 17 |
| 22 | 91.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 26 | 91.76 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 27 | 91.77 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 28 | 91.77 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 29 | 91.78 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 30 | 91.78 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 31 | 91.80 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 34 | 91.81 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 38 | 91.81 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 111 | 92.15 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 144 | 92.44 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 7 |
| 146 | 92.45 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 149 | 92.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 162 | 92.55 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 171 | 92.63 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 182 | 92.73 | temperature | 25 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 191 | 92.77 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 206 | 92.85 | temperature | 20 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 208 | 92.85 | temperature | 20 | 14400 | < th | dose dependent | rect. | 20 | 8 |
| 248 | 92.94 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 254 | 92.95 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 265 | 92.98 | temperature | 20 | 4320 | > th | dose dependent | sin | 8 | NA |
| 355 | 93.16 | temperature | 20 | 14400 | < th | dose dependent | sin | 13 | NA |
| 417 | 93.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 18 |
| 471 | 93.36 | temperature | 20 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 526 | 93.47 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 547 | 93.50 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 564 | 93.53 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 568 | 93.53 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 19 |
| 572 | 93.54 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 579 | 93.55 | temperature | 20 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 585 | 93.55 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 16 |
| 592 | 93.55 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 18 |
| 705 | 93.64 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 724 | 93.65 | temperature | 30 | 720 | < th | dose dependent | sin | 3 | NA |
| 778 | 93.68 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 806 | 93.70 | temperature | 20 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 835 | 93.72 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 12 |
| 848 | 93.73 | temperature | 20 | 14400 | > th | dose independent | rect. | 1 | 2 |