Os01g0841000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ENTH/VHS domain containing protein.
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Os01g0841000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ENTH/VHS domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.96 | 0.407 | 11.7 | 0.423 | 1.5 | 0.811 | -0.0524 | -1.02 | 0.42 | 3.02 | 19.99 | 1442 | -- | -- |
| 77.03 | 0.409 | 11.7 | 0.419 | 1.48 | 0.816 | 0.147 | -- | 0.413 | 3.05 | 19.74 | 1497 | -- | -- |
| 74.97 | 0.403 | 11.7 | 0.424 | 1.5 | 0.811 | -- | -1.01 | 0.42 | 3.02 | 19.99 | 1442 | -- | -- |
| 76.6 | 0.408 | 11.7 | 0.342 | 1.49 | 0.82 | -- | -- | 0.371 | 3.12 | 19.7 | 1541 | -- | -- |
| 92.88 | 0.449 | 11.7 | 0.393 | -- | 1.4 | -- | -0.129 | 0.457 | -- | 6.232 | 407 | -- | -- |
| 101.29 | 0.472 | 11.7 | 0.294 | 1.46 | -- | -0.176 | -- | 0.217 | 3.07 | -- | -- | -- | -- |
| 101.39 | 0.472 | 11.7 | 0.297 | 1.46 | -- | -- | -- | 0.218 | 3.07 | -- | -- | -- | -- |
| 90.39 | 0.443 | 11.7 | 0.262 | -- | 1.44 | -- | -- | 0.296 | -- | 6.15 | 407 | -- | -- |
| 79.11 | 0.414 | 11.7 | -- | 1.49 | 0.84 | -- | -- | 0.373 | 3.11 | 20 | 1571 | -- | -- |
| 223.01 | 0.698 | 11.7 | 0.36 | -- | -- | -- | -- | 0.256 | -- | -- | -- | -- | -- |
| 103.73 | 0.476 | 11.7 | -- | 1.46 | -- | -- | -- | 0.185 | 3.07 | -- | -- | -- | -- |
| 92.06 | 0.447 | 11.7 | -- | -- | 1.46 | -- | -- | 0.265 | -- | 6.19 | 413 | -- | -- |
| 226.42 | 0.702 | 11.7 | -- | -- | -- | -- | -- | 0.216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.29 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 2 | 71.96 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 3 | 71.97 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 6 | 72.05 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 14 | 72.22 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 25 | 72.39 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 53 | 72.74 | wind | 5 | 43200 | > th | dose independent | sin | 9 | NA |
| 55 | 72.74 | wind | 5 | 43200 | < th | dose independent | sin | 9 | NA |
| 73 | 72.85 | wind | 5 | 43200 | > th | dose dependent | sin | 10 | NA |
| 107 | 73.31 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 133 | 73.53 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 135 | 73.55 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 140 | 73.56 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 145 | 73.63 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 147 | 73.64 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 159 | 73.77 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 12 |
| 170 | 73.84 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 184 | 73.91 | temperature | 20 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 224 | 74.00 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 7 |
| 236 | 74.02 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 250 | 74.07 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 274 | 74.11 | temperature | 25 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 287 | 74.13 | temperature | 20 | 4320 | > th | dose dependent | sin | 21 | NA |
| 368 | 74.28 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 449 | 74.41 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 457 | 74.43 | wind | 5 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 460 | 74.43 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 571 | 74.59 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 618 | 74.65 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 622 | 74.66 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 671 | 74.72 | wind | 5 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 728 | 74.79 | temperature | 20 | 43200 | > th | dose independent | sin | 18 | NA |
| 782 | 74.84 | radiation | 20 | 1440 | < th | dose independent | rect. | 7 | 16 |
| 803 | 74.86 | radiation | 20 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 815 | 74.87 | radiation | 20 | 1440 | < th | dose independent | rect. | 7 | 11 |
| 868 | 74.93 | radiation | 20 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 870 | 74.93 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 913 | 74.96 | radiation | 20 | 1440 | < th | dose independent | no | NA | NA |
| 914 | 74.96 | radiation | 10 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 916 | 74.96 | radiation | 20 | 1440 | < th | dose independent | rect. | 4 | 14 |
| 963 | 74.97 | radiation | 20 | 1440 | < th | dose independent | rect. | 21 | 21 |
| 965 | 74.97 | radiation | 20 | 1440 | < th | dose independent | rect. | 19 | 22 |