Os01g0840900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0840900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 186.8 | 0.642 | 5.88 | 1.94 | 2.82 | 1.03 | 0.924 | 0.513 | 0.848 | 0.967 | 70 | 1419 | -- | -- |
| 186.77 | 0.637 | 5.88 | 2.04 | 2.92 | 1.1 | 0.868 | -- | 0.873 | 0.969 | 70 | 1330 | -- | -- |
| 190.35 | 0.643 | 5.88 | 1.9 | 2.82 | 1.01 | -- | 0.513 | 0.84 | 0.973 | 70.26 | 1418 | -- | -- |
| 189.83 | 0.642 | 5.87 | 1.98 | 2.96 | 1.11 | -- | -- | 0.88 | 0.977 | 71.23 | 1300 | -- | -- |
| 389.56 | 0.919 | 5.89 | 1.79 | -- | 1.73 | -- | 1.02 | 0.758 | -- | 83.89 | 17 | -- | -- |
| 232.75 | 0.715 | 5.9 | 1.77 | 2.78 | -- | 0.669 | -- | 0.714 | 0.92 | -- | -- | -- | -- |
| 234.63 | 0.717 | 5.9 | 1.75 | 2.78 | -- | -- | -- | 0.71 | 0.926 | -- | -- | -- | -- |
| 394.4 | 0.925 | 5.86 | 1.77 | -- | 1.69 | -- | -- | 0.759 | -- | 83.65 | 17 | -- | -- |
| 274.25 | 0.771 | 5.93 | -- | 3.09 | 1.5 | -- | -- | 0.703 | 0.811 | 82 | 2443 | -- | -- |
| 715.78 | 1.25 | 5.86 | 1.85 | -- | -- | -- | -- | 0.763 | -- | -- | -- | -- | -- |
| 315.27 | 0.831 | 5.95 | -- | 2.81 | -- | -- | -- | 0.515 | 0.953 | -- | -- | -- | -- |
| 475.42 | 1.02 | 5.91 | -- | -- | 1.71 | -- | -- | 0.539 | -- | 82 | 2443 | -- | -- |
| 806.3 | 1.33 | 5.9 | -- | -- | -- | -- | -- | 0.557 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 185.62 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 5 | 186.08 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 6 | 186.39 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 11 | 186.41 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 21 | 22 |
| 12 | 186.42 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 23 | 20 |
| 15 | 186.43 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 21 | 186.55 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 24 | 186.94 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 26 | 186.98 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 3 | 21 |
| 27 | 186.98 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 30 | 186.99 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 46 | 187.01 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 48 | 187.02 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 49 | 187.02 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 7 | 17 |
| 61 | 187.03 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 7 | 15 |
| 122 | 187.71 | humidity | 70.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 126 | 187.78 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 7 | 11 |
| 134 | 187.79 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 140 | 187.81 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 143 | 187.87 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 200 | 188.58 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 257 | 188.59 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 271 | 188.68 | humidity | 70.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 339 | 189.73 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 363 | 190.00 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 364 | 190.01 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 365 | 190.03 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 8 | 13 |
| 371 | 190.09 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 375 | 190.12 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 376 | 190.14 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 381 | 190.23 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 387 | 190.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 389 | 190.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 8 |
| 395 | 190.34 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 400 | 190.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 401 | 190.41 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 501 | 191.19 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 503 | 191.21 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 505 | 191.23 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 507 | 191.24 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 4 |
| 513 | 191.27 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 522 | 191.34 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 537 | 191.44 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 8 | 13 |
| 548 | 191.49 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 23 | NA |
| 558 | 191.55 | humidity | 70.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 587 | 191.71 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 8 | 6 |
| 625 | 191.99 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 641 | 192.07 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 657 | 192.08 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 0 | NA |
| 685 | 192.16 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 713 | 192.24 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 737 | 192.30 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 745 | 192.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 8 |
| 782 | 192.40 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 1 | 13 |
| 785 | 192.41 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 3 | 11 |
| 795 | 192.44 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 21 | 17 |
| 799 | 192.45 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 802 | 192.46 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 23 | 15 |
| 836 | 192.52 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 984 | 192.75 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 986 | 192.75 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 993 | 192.77 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 4 |