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Os01g0838300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.49 (0.0404) R2 : 0.633
β1 : 3.18 (0.149) R2dD : 0.4 R2D : 0.362
β2 : 1.2 (0.104) R2dC : 0.108 R2C : 0.0846
β3 : 1.43 (0.153) R2dE : 0.0735 R2E : 0.12
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -4.16 (0.623) R2dD*E : 0.0384 R2D*E : -0.00749
γ1 : 0.714 (0.0848) R2dN8 : 0.0765 R2N8 : -0.00469
σ : 0.742
deviance : 253.52
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C
peak time of C : 17.8
E
wheather : radiation
threshold : 30
memory length : 4124
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
252.41 0.746 6.49 3.18 1.19 1.43 0.696 -4.16 0.713 17.9 29.99 4129 -- --
278.28 0.777 6.48 3.07 1.16 1.47 0.665 -- 0.715 17.9 30 4120 -- --
253.52 0.742 6.49 3.18 1.2 1.43 -- -4.16 0.714 17.8 30 4124 -- --
279.56 0.779 6.48 3.07 1.16 1.46 -- -- 0.716 17.9 29.99 4127 -- --
326.47 0.842 6.49 3.19 -- 1.45 -- -4.08 0.69 -- 30 4194 -- --
323.01 0.843 6.43 3.32 1.19 -- 0.652 -- 0.739 17.5 -- -- -- --
323.98 0.843 6.43 3.32 1.19 -- -- -- 0.742 17.4 -- -- -- --
350.76 0.872 6.48 3.06 -- 1.46 -- -- 0.697 -- 30 4189 -- --
460.85 1 6.47 -- 1.02 1.55 -- -- 0.758 18.3 29.93 29992 -- --
397.69 0.932 6.42 3.28 -- -- -- -- 0.713 -- -- -- -- --
614.76 1.16 6.52 -- 1.13 -- -- -- 0.372 17.5 -- -- -- --
439.63 0.977 6.57 -- -- 3.11 -- -- 0.0264 -- 39.88 47520 -- --
681.66 1.22 6.5 -- -- -- -- -- 0.349 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 232.64 radiation 40 43200 < th dose independent rect. 16 5
7 243.89 radiation 30 14400 > th dose dependent rect. 15 17
8 244.22 wind 1 43200 < th dose dependent rect. 19 4
9 244.31 wind 1 43200 < th dose dependent rect. 21 2
11 246.08 radiation 40 43200 < th dose independent rect. 16 1
13 246.23 radiation 10 43200 > th dose independent rect. 5 1
26 247.13 radiation 10 43200 < th dose independent rect. 9 1
27 247.24 wind 1 43200 < th dose independent rect. 21 2
28 247.29 radiation 10 43200 < th dose dependent rect. 5 8
29 247.31 radiation 10 43200 < th dose dependent rect. 7 2
30 247.32 wind 1 43200 < th dose independent rect. 19 4
31 247.33 radiation 10 43200 < th dose dependent rect. 22 15
33 247.34 radiation 10 43200 < th dose dependent rect. 3 10
67 247.90 wind 1 43200 > th dose independent rect. 19 6
76 247.95 radiation 10 43200 < th dose dependent rect. 6 4
79 247.96 radiation 30 14400 < th dose independent rect. 15 17
83 248.13 radiation 10 43200 < th dose dependent sin 5 NA
94 248.53 atmosphere 1010 14400 > th dose independent rect. 5 2
96 248.65 wind 1 43200 < th dose independent rect. 19 6
127 249.04 radiation 10 43200 < th dose independent rect. 11 1
129 249.12 atmosphere 1010 14400 < th dose independent rect. 5 2
136 249.42 wind 1 43200 < th dose independent rect. 21 4
180 250.16 radiation 10 14400 < th dose independent rect. 17 1
191 250.40 radiation 1 14400 > th dose dependent rect. 5 1
207 250.51 radiation 20 14400 < th dose independent sin 12 NA
217 250.68 radiation 10 43200 < th dose dependent rect. 7 23
223 250.83 radiation 10 43200 < th dose dependent rect. 5 23
225 250.84 radiation 10 43200 < th dose dependent rect. 5 18
233 250.88 radiation 40 43200 > th dose independent rect. 8 1
261 250.91 radiation 10 43200 < th dose dependent no NA NA
309 251.04 radiation 10 43200 < th dose dependent rect. 13 23
315 251.15 wind 1 43200 > th dose independent rect. 19 3
334 251.21 radiation 10 43200 < th dose independent rect. 9 7
336 251.23 radiation 10 43200 < th dose dependent rect. 11 23
339 251.28 radiation 10 43200 > th dose independent rect. 7 1
359 251.43 radiation 10 43200 < th dose independent rect. 11 5
381 251.48 radiation 40 43200 > th dose dependent rect. 7 1
402 251.56 radiation 10 43200 < th dose independent rect. 14 2
424 251.69 radiation 20 14400 < th dose independent rect. 21 13
428 251.71 radiation 20 14400 < th dose independent rect. 2 8
480 252.00 wind 1 43200 > th dose independent rect. 18 8
509 252.08 humidity 60 43200 > th dose independent rect. 13 3
660 252.27 radiation 10 14400 < th dose independent rect. 16 12
664 252.30 radiation 10 14400 < th dose independent rect. 16 10
672 252.33 radiation 10 14400 < th dose independent rect. 16 7
687 252.42 radiation 1 14400 > th dose dependent rect. 17 14
703 252.59 wind 1 43200 < th dose independent rect. 19 2
706 252.60 radiation 20 43200 < th dose independent rect. 21 9
770 252.84 radiation 10 43200 > th dose independent rect. 16 17
771 252.84 radiation 10 43200 < th dose independent rect. 9 19
776 252.85 radiation 10 43200 < th dose independent rect. 9 13
797 252.94 radiation 30 43200 < th dose dependent rect. 11 1
832 253.17 humidity 60 43200 < th dose independent rect. 13 3