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Os01g0837200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.77 (0.0418) R2 : 0.416
β1 : -2.66 (0.165) R2dD : 0.399 R2D : 0.125
β2 : -- (--) R2dC : -- R2C : --
β3 : -0.682 (0.176) R2dE : 0.032 R2E : 0.0203
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 7.22 (0.629) R2dD*E : 0.22 R2D*E : -0.0793
γ1 : -0.816 (0.089) R2dN8 : 0.12 R2N8 : -0.00699
σ : 0.766
deviance : 270.32
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C
peak time of C : --
E
wheather : radiation
threshold : 13.9
memory length : 5318
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 16
open length of G : 0.286

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
254.02 0.749 8.8 -2.65 0.0494 -0.764 2.77 7 -0.902 3.24 9.615 4439 16 0.964
312.84 0.824 8.89 -1.89 0.114 -0.592 2.76 -- -0.762 2.75 17.79 845 15.9 0.95
270.15 0.766 8.77 -2.5 0.192 -0.671 -- 7.28 -0.843 2.96 13.78 5309 16 0.296
312.91 0.824 8.9 -1.93 0.00785 -0.919 -- -- -0.946 14.3 25.14 1409 16.5 0.0131
270.32 0.766 8.77 -2.66 -- -0.682 -- 7.22 -0.816 -- 13.9 5318 16 0.286
327.02 0.848 8.88 -1.9 0.0507 -- 2.33 -- -0.667 3.03 -- -- -- --
342.53 0.867 8.88 -1.95 0.228 -- -- -- -0.682 7.65 -- -- -- --
311.1 0.821 8.94 -1.82 -- -1.15 -- -- -0.995 -- 28.9 1408 16.5 0.0166
394.27 0.925 8.95 -- 0.115 -1.62 -- -- -0.809 13.8 42.9 4334 16.4 0.483
345.33 0.868 8.89 -1.95 -- -- -- -- -0.679 -- -- -- -- --
443.22 0.985 8.83 -- 0.215 -- -- -- -0.464 8.28 -- -- -- --
383.3 0.912 8.94 -- -- -1.79 -- -- -0.844 -- 30 4315 16.5 2.08
445.79 0.986 8.84 -- -- -- -- -- -0.462 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 253.32 wind 1 14400 < th dose dependent rect. 12 2
4 258.56 radiation 10 4320 < th dose dependent rect. 16 1
5 258.78 humidity 50 43200 > th dose dependent rect. 4 2
13 261.24 wind 1 43200 < th dose dependent rect. 9 5
15 261.91 humidity 60 43200 < th dose dependent rect. 8 1
16 262.28 humidity 80 43200 < th dose independent rect. 12 18
17 262.30 humidity 80 43200 > th dose independent rect. 12 18
19 262.51 humidity 50 43200 > th dose dependent rect. 1 5
20 262.56 humidity 80 14400 > th dose independent rect. 2 1
33 263.41 humidity 60 43200 < th dose dependent rect. 20 14
37 263.51 humidity 60 43200 < th dose independent rect. 20 13
40 263.61 wind 1 43200 > th dose independent rect. 14 2
42 263.64 humidity 50 43200 > th dose independent sin 9 NA
44 263.70 humidity 50 43200 > th dose dependent rect. 1 1
50 263.81 humidity 90 4320 < th dose independent rect. 1 1
59 264.03 atmosphere 1015 43200 < th dose independent rect. 19 1
63 264.08 humidity 70 43200 > th dose dependent rect. 22 8
73 264.45 humidity 50 43200 > th dose dependent rect. 22 8
80 264.51 humidity 80 43200 > th dose independent rect. 21 22
85 264.60 radiation 10 4320 < th dose dependent rect. 16 11
88 264.63 radiation 10 4320 < th dose dependent rect. 16 8
90 264.65 wind 9 43200 > th dose dependent rect. 13 2
92 264.66 humidity 50 43200 < th dose independent sin 9 NA
103 264.73 temperature 30 43200 > th dose dependent rect. 8 1
137 264.93 wind 9 43200 > th dose dependent rect. 11 4
139 264.96 wind 1 14400 < th dose independent rect. 12 1
142 265.09 humidity 70 43200 > th dose dependent rect. 22 1
146 265.20 wind 9 43200 > th dose independent rect. 11 3
149 265.25 humidity 80 43200 < th dose independent rect. 21 21
150 265.28 humidity 50 43200 > th dose independent rect. 17 20
155 265.37 humidity 50 43200 < th dose independent rect. 17 20
165 265.50 humidity 50 43200 > th dose independent rect. 16 22
171 265.59 humidity 50 43200 < th dose dependent rect. 11 1
178 265.73 humidity 50 43200 < th dose independent rect. 16 22
191 265.92 humidity 60 43200 < th dose dependent rect. 24 10
192 265.93 humidity 50 43200 > th dose independent rect. 19 17
202 266.02 wind 1 43200 < th dose independent rect. 14 2
204 266.03 humidity 50 43200 < th dose independent rect. 19 17
210 266.08 humidity 90 43200 < th dose dependent rect. 22 1
213 266.10 wind 1 43200 < th dose dependent rect. 8 9
215 266.13 humidity 70 43200 > th dose dependent rect. 22 4
228 266.30 humidity 60 43200 > th dose independent rect. 21 12
229 266.30 humidity 90 43200 < th dose dependent rect. 1 1
237 266.39 humidity 60 43200 < th dose independent rect. 8 1
243 266.41 humidity 50 43200 < th dose dependent rect. 16 22
255 266.60 radiation 30 43200 > th dose independent rect. 15 17
278 266.83 humidity 50 43200 < th dose dependent sin 7 NA
281 266.85 wind 7 14400 < th dose independent rect. 15 1
294 266.94 humidity 50 43200 < th dose dependent rect. 19 18
297 266.98 wind 9 43200 > th dose independent rect. 13 1
299 266.99 humidity 50 43200 < th dose independent rect. 3 9
309 267.03 humidity 60 43200 < th dose independent rect. 24 9
323 267.07 humidity 50 43200 < th dose dependent rect. 13 23
326 267.09 humidity 50 43200 < th dose dependent rect. 3 10
337 267.11 humidity 50 43200 < th dose dependent rect. 7 6
360 267.21 humidity 90 43200 < th dose dependent rect. 22 4
368 267.27 humidity 50 43200 < th dose dependent rect. 11 23
370 267.29 humidity 50 43200 < th dose dependent no NA NA
371 267.29 humidity 50 43200 < th dose dependent rect. 3 19
393 267.31 humidity 50 43200 < th dose dependent rect. 6 23
395 267.31 humidity 50 43200 < th dose dependent rect. 19 23
506 267.52 humidity 50 43200 > th dose independent rect. 2 10
508 267.53 atmosphere 1015 43200 > th dose dependent rect. 11 8
527 267.58 temperature 30 43200 > th dose independent rect. 8 1
586 267.72 wind 1 43200 < th dose dependent rect. 8 11
615 267.84 humidity 60 4320 < th dose dependent rect. 15 21
617 267.86 atmosphere 1015 43200 > th dose dependent rect. 11 11
654 267.97 humidity 50 43200 < th dose dependent rect. 13 21
697 268.19 atmosphere 1015 43200 > th dose dependent rect. 12 4
703 268.21 humidity 90 43200 < th dose dependent rect. 21 9
733 268.39 wind 7 14400 > th dose independent rect. 15 1
749 268.51 wind 1 43200 < th dose independent rect. 8 9
792 268.78 humidity 50 43200 < th dose dependent rect. 13 9
846 269.11 radiation 10 4320 < th dose dependent sin 16 NA
850 269.15 wind 9 43200 < th dose independent rect. 11 3
853 269.17 humidity 60 4320 < th dose dependent sin 10 NA
870 269.28 atmosphere 1015 43200 > th dose independent rect. 16 5
878 269.31 humidity 60 4320 > th dose independent rect. 16 19
885 269.35 temperature 30 43200 < th dose independent rect. 3 6
893 269.37 humidity 60 4320 < th dose independent rect. 16 19
894 269.38 temperature 30 43200 < th dose independent rect. 5 4
902 269.42 humidity 50 4320 > th dose independent sin 9 NA
915 269.48 wind 1 14400 < th dose dependent rect. 12 8
922 269.55 atmosphere 1015 43200 > th dose dependent rect. 15 9
929 269.59 atmosphere 1015 43200 > th dose dependent rect. 13 1
932 269.60 radiation 10 1440 < th dose dependent rect. 18 9
939 269.64 temperature 30 43200 < th dose independent rect. 1 8
943 269.68 humidity 70 43200 > th dose dependent sin 10 NA
963 269.74 humidity 50 43200 < th dose independent no NA NA
964 269.74 humidity 50 43200 < th dose independent rect. 3 19
982 269.75 humidity 50 43200 < th dose independent rect. 10 2
983 269.76 temperature 30 43200 < th dose independent rect. 7 2
997 269.83 atmosphere 1015 43200 > th dose dependent rect. 17 6