Os01g0837000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os01g0837000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 277.11 | 0.782 | 8.69 | 1.21 | 2.2 | 2.06 | 1.16 | -1.21 | 0.668 | 19.6 | 72.99 | 49 | 21.3 | -- |
| 279 | 0.778 | 8.69 | 1.24 | 2.18 | 2.05 | 1.71 | -- | 0.667 | 19.6 | 73.46 | 52 | 21.2 | -- |
| 279.74 | 0.779 | 8.69 | 1.19 | 2.33 | 2.17 | -- | -1.75 | 0.674 | 19.5 | 72.44 | 54 | 21.6 | -- |
| 287.05 | 0.789 | 8.69 | 1.21 | 2.21 | 2.04 | -- | -- | 0.674 | 19.7 | 72.93 | 54 | 21.1 | -- |
| 419.28 | 0.959 | 8.64 | 1.13 | -- | 0.825 | -- | -0.648 | 0.649 | -- | 81.14 | 52 | 6.97 | -- |
| 349.14 | 0.876 | 8.69 | 1.23 | 1.26 | -- | 1.15 | -- | 0.57 | 21.3 | -- | -- | -- | -- |
| 353.76 | 0.881 | 8.69 | 1.18 | 1.25 | -- | -- | -- | 0.567 | 21.5 | -- | -- | -- | -- |
| 354.04 | 0.876 | 8.65 | 1.17 | -- | 1.26 | -- | -- | 0.563 | -- | -556.3 | 14 | 8.72 | -- |
| 324.3 | 0.839 | 8.7 | -- | 2.07 | 1.96 | -- | -- | 0.558 | 19.8 | 75.5 | 60 | 20.8 | -- |
| 445.43 | 0.986 | 8.65 | 1.19 | -- | -- | -- | -- | 0.564 | -- | -- | -- | -- | -- |
| 390.69 | 0.925 | 8.72 | -- | 1.25 | -- | -- | -- | 0.436 | 21.5 | -- | -- | -- | -- |
| 390.96 | 0.924 | 8.68 | -- | -- | 1.26 | -- | -- | 0.437 | -- | -613.4 | 2 | 8.57 | -- |
| 482.89 | 1.03 | 8.68 | -- | -- | -- | -- | -- | 0.431 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 279.88 | humidity | 70.0 | 30 | > th | dose dependent | sin | 3 | NA |
| 5 | 281.11 | radiation | 1.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 12 | 281.78 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 18 |
| 16 | 282.34 | radiation | 1.0 | 270 | < th | dose independent | sin | 3 | NA |
| 19 | 282.51 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 50 | 285.83 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 51 | 285.85 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 53 | 285.95 | radiation | 1.0 | 270 | > th | dose independent | sin | 3 | NA |
| 54 | 285.97 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 79 | 286.97 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 18 |
| 119 | 288.04 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 12 | 20 |
| 143 | 288.83 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 158 | 289.06 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 165 | 289.13 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 174 | 289.37 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 190 | 289.92 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 261 | 291.24 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 268 | 291.36 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 272 | 291.48 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 297 | 291.89 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 318 | 292.13 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 327 | 292.23 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 338 | 292.36 | radiation | 20.0 | 90 | < th | dose independent | rect. | 12 | 19 |
| 366 | 292.79 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 7 |
| 369 | 292.82 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 372 | 292.86 | humidity | 80.0 | 90 | > th | dose independent | sin | 4 | NA |
| 376 | 292.93 | humidity | 80.0 | 30 | < th | dose independent | sin | 3 | NA |
| 399 | 293.21 | radiation | 10.0 | 90 | > th | dose independent | rect. | 15 | 23 |
| 402 | 293.27 | humidity | 80.0 | 30 | > th | dose independent | rect. | 5 | 15 |
| 405 | 293.32 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 406 | 293.32 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 410 | 293.36 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 429 | 293.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 430 | 293.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 447 | 293.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 475 | 293.97 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 1 | 10 |
| 502 | 294.22 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 20 |
| 540 | 294.40 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 542 | 294.40 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 543 | 294.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 546 | 294.40 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 547 | 294.40 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 554 | 294.43 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 557 | 294.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 576 | 294.63 | radiation | 10.0 | 90 | > th | dose independent | rect. | 7 | 10 |
| 605 | 294.92 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 15 |
| 702 | 295.84 | humidity | 80.0 | 30 | < th | dose independent | rect. | 23 | 15 |
| 703 | 295.85 | humidity | 90.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 718 | 295.95 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 757 | 296.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 759 | 296.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 801 | 296.37 | humidity | 80.0 | 30 | < th | dose independent | rect. | 2 | 12 |
| 840 | 296.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 847 | 296.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 15 |
| 849 | 296.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 15 |
| 854 | 296.74 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 11 | 21 |
| 867 | 296.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 6 |
| 869 | 296.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 894 | 296.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 943 | 297.04 | temperature | 15.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 947 | 297.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 948 | 297.08 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 950 | 297.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 956 | 297.14 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 10 |