Os01g0834900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0834900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 276.43 | 0.781 | 10.4 | -0.963 | 4.42 | -5.43 | -3.63 | 8.29 | 0.266 | 5.01 | 0.3391 | 725 | -- | -- |
| 290.03 | 0.793 | 10.3 | -0.754 | 5.89 | -6.99 | 2.33 | -- | 0.296 | 5.11 | 0.311 | 709 | -- | -- |
| 280.98 | 0.781 | 10.4 | -0.862 | 3.91 | -5.09 | -- | 4.77 | 0.31 | 5.19 | 0.03407 | 757 | -- | -- |
| 303.21 | 0.811 | 10.3 | -0.782 | 5.45 | -6.89 | -- | -- | 0.293 | 5.27 | 0.3535 | 743 | -- | -- |
| 296.53 | 0.802 | 10.5 | -1.29 | -- | -2.45 | -- | 4.86 | 0.199 | -- | 0.04028 | 1290 | -- | -- |
| 392.08 | 0.928 | 10.4 | -0.103 | 0.797 | -- | -0.392 | -- | 0.589 | 23.8 | -- | -- | -- | -- |
| 392.61 | 0.928 | 10.4 | -0.0893 | 0.8 | -- | -- | -- | 0.589 | 0.0814 | -- | -- | -- | -- |
| 302.19 | 0.81 | 10.4 | -0.693 | -- | -3.09 | -- | -- | 0.309 | -- | 0.3676 | 1329 | -- | -- |
| 315.97 | 0.828 | 10.3 | -- | 4.79 | -6.14 | -- | -- | 0.436 | 5.36 | 0.3807 | 754 | -- | -- |
| 432.92 | 0.972 | 10.3 | -0.0639 | -- | -- | -- | -- | 0.601 | -- | -- | -- | -- | -- |
| 392.82 | 0.927 | 10.4 | -- | 0.799 | -- | -- | -- | 0.599 | 0.0751 | -- | -- | -- | -- |
| 317.24 | 0.83 | 10.4 | -- | -- | -2.92 | -- | -- | 0.386 | -- | 0.36 | 1328 | -- | -- |
| 433.03 | 0.971 | 10.3 | -- | -- | -- | -- | -- | 0.608 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 278.86 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 21 |
| 18 | 282.98 | radiation | 1 | 720 | < th | dose dependent | sin | 13 | NA |
| 20 | 283.69 | radiation | 1 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 24 | 285.01 | radiation | 1 | 720 | < th | dose dependent | no | NA | NA |
| 27 | 285.31 | radiation | 20 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 30 | 285.63 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 33 | 286.02 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 37 | 286.30 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 38 | 286.38 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 39 | 286.42 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 40 | 286.48 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 42 | 286.51 | radiation | 1 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 46 | 286.72 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 55 | 287.10 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 56 | 287.13 | radiation | 20 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 60 | 287.18 | radiation | 20 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 90 | 287.63 | radiation | 1 | 4320 | < th | dose dependent | rect. | 16 | 14 |
| 93 | 287.71 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 107 | 287.98 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 112 | 288.15 | radiation | 1 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 120 | 288.42 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 130 | 288.42 | radiation | 1 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 154 | 288.73 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 164 | 288.94 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 183 | 289.25 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 187 | 289.34 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 208 | 289.50 | radiation | 1 | 4320 | < th | dose dependent | sin | 13 | NA |
| 210 | 289.51 | radiation | 1 | 4320 | < th | dose dependent | rect. | 16 | 18 |
| 225 | 289.70 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 228 | 289.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 299 | 290.54 | radiation | 1 | 720 | < th | dose dependent | rect. | 4 | 14 |
| 310 | 290.73 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 316 | 290.77 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 328 | 290.93 | humidity | 50 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 341 | 291.10 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 362 | 291.30 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 10 |
| 363 | 291.32 | wind | 5 | 43200 | < th | dose independent | sin | 18 | NA |
| 371 | 291.40 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 385 | 291.50 | radiation | 10 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 387 | 291.50 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 22 |
| 419 | 291.66 | wind | 5 | 43200 | > th | dose independent | sin | 18 | NA |
| 420 | 291.66 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 422 | 291.66 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 7 |
| 461 | 291.83 | radiation | 10 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 470 | 291.93 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 472 | 291.94 | wind | 9 | 43200 | < th | dose dependent | rect. | 12 | 4 |
| 501 | 292.08 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 543 | 292.30 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 552 | 292.36 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 567 | 292.52 | wind | 9 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 571 | 292.55 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 578 | 292.56 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 579 | 292.56 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 17 |
| 582 | 292.57 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 9 |
| 583 | 292.57 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 586 | 292.57 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 17 |
| 597 | 292.61 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 3 | NA |
| 614 | 292.65 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 643 | 292.74 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 3 | NA |
| 656 | 292.77 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 6 | 11 |
| 676 | 292.81 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 703 | 292.86 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 6 | 9 |
| 705 | 292.86 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 803 | 293.12 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 848 | 293.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 874 | 293.29 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 876 | 293.29 | wind | 9 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 902 | 293.37 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 930 | 293.47 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 972 | 293.63 | humidity | 60 | 43200 | < th | dose dependent | rect. | 18 | 1 |