Os01g0833600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATP-dependent Clp protease adaptor protein ClpS family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0833600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : ATP-dependent Clp protease adaptor protein ClpS family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 282.05 | 0.789 | 9.74 | 1.08 | 5.71 | 1.41 | -0.603 | -0.411 | -0.942 | 9.65 | 20.06 | 1361 | -- | -- |
| 282.35 | 0.783 | 9.74 | 1.13 | 5.71 | 1.38 | -0.565 | -- | -0.937 | 9.64 | 20 | 1358 | -- | -- |
| 283.06 | 0.784 | 9.74 | 1.1 | 5.74 | 1.42 | -- | -0.271 | -0.931 | 9.64 | 20.01 | 1341 | -- | -- |
| 283.23 | 0.784 | 9.73 | 1.12 | 5.73 | 1.41 | -- | -- | -0.919 | 9.65 | 20.01 | 1341 | -- | -- |
| 963.65 | 1.45 | 9.82 | 1.52 | -- | 3.26 | -- | -1.49 | -0.632 | -- | 1.998 | 1551 | -- | -- |
| 356.86 | 0.886 | 9.64 | 1.6 | 5.54 | -- | -0.726 | -- | -0.504 | 9.54 | -- | -- | -- | -- |
| 358.81 | 0.887 | 9.64 | 1.57 | 5.54 | -- | -- | -- | -0.506 | 9.53 | -- | -- | -- | -- |
| 978.17 | 1.46 | 9.82 | 1.53 | -- | 3.25 | -- | -- | -0.626 | -- | 1.998 | 1551 | -- | -- |
| 316.6 | 0.829 | 9.72 | -- | 5.66 | 1.44 | -- | -- | -1.01 | 9.62 | 20.01 | 1361 | -- | -- |
| 2168.08 | 2.18 | 9.79 | 1.53 | -- | -- | -- | -- | -0.491 | -- | -- | -- | -- | -- |
| 423.62 | 0.963 | 9.68 | -- | 5.54 | -- | -- | -- | -0.68 | 9.51 | -- | -- | -- | -- |
| 1039.62 | 1.51 | 9.86 | -- | -- | 3.25 | -- | -- | -0.795 | -- | 1.998 | 1551 | -- | -- |
| 2229.69 | 2.2 | 9.83 | -- | -- | -- | -- | -- | -0.661 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 272.05 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 7 | 275.14 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 36 | 278.61 | radiation | 20 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 54 | 279.01 | radiation | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 56 | 279.02 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 19 |
| 59 | 279.29 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
| 68 | 279.70 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 70 | 279.75 | radiation | 20 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 91 | 280.17 | humidity | 60 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 100 | 280.48 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 105 | 280.76 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 109 | 280.97 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 129 | 281.54 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 134 | 281.77 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 266 | 283.88 | humidity | 80 | 1440 | < th | dose dependent | sin | 7 | NA |
| 288 | 284.28 | radiation | 20 | 1440 | > th | dose independent | rect. | 13 | 21 |
| 305 | 284.37 | humidity | 90 | 1440 | < th | dose dependent | sin | 4 | NA |
| 376 | 285.00 | radiation | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 381 | 285.04 | radiation | 10 | 1440 | > th | dose dependent | rect. | 6 | 4 |
| 446 | 285.40 | radiation | 10 | 1440 | > th | dose dependent | rect. | 15 | 19 |
| 470 | 285.74 | radiation | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 483 | 285.86 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 487 | 285.92 | humidity | 50 | 1440 | > th | dose dependent | sin | 3 | NA |
| 512 | 286.14 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 542 | 286.35 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 561 | 286.56 | radiation | 40 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 563 | 286.62 | radiation | 40 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 703 | 287.42 | radiation | 20 | 1440 | > th | dose independent | no | NA | NA |
| 799 | 287.47 | humidity | 70 | 1440 | > th | dose independent | sin | 7 | NA |
| 844 | 287.69 | radiation | 40 | 1440 | > th | dose independent | sin | 12 | NA |