FiT-DB / Search/ Help/ Sample detail

Os01g0833200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0241) R2 : 0.843
β1 : -1.4 (0.0882) R2dD : 0.0909 R2D : 0.0679
β2 : 2.9 (0.0621) R2dC : 0.758 R2C : 0.737
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.436 (0.0514) R2dN8 : 0.0333 R2N8 : -0.00243
σ : 0.453
deviance : 93.47
__
_____
C
peak time of C : 7.35
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
80.92 0.423 10.1 -1.44 2.72 -0.787 0.621 -0.16 -0.444 6.3 20.82 10 -- --
81.05 0.419 10.1 -1.44 2.72 -0.783 0.653 -- -0.443 6.31 20.84 9 -- --
81.85 0.421 10.1 -1.44 2.73 -0.79 -- -0.217 -0.446 6.28 20.91 9 -- --
82.13 0.422 10.1 -1.43 2.72 -0.795 -- -- -0.446 6.28 20.92 9 -- --
448.83 0.992 10.1 -1.34 -- -0.947 -- -0.269 -0.41 -- 6.9 6 -- --
92.03 0.45 10.1 -1.42 2.9 -- 0.73 -- -0.434 7.36 -- -- -- --
93.47 0.453 10.1 -1.4 2.9 -- -- -- -0.436 7.35 -- -- -- --
449.29 0.992 10.1 -1.34 -- -0.946 -- -- -0.41 -- 6.9 6 -- --
135.98 0.543 10.1 -- 2.71 -0.777 -- -- -0.299 6.32 20.13 12 -- --
540.92 1.09 10.1 -1.36 -- -- -- -- -0.388 -- -- -- -- --
145.47 0.564 10 -- 2.89 -- -- -- -0.28 7.39 -- -- -- --
494.26 1.04 10.1 -- -- -0.977 -- -- -0.261 -- 7.341 2 -- --
589.44 1.13 10.1 -- -- -- -- -- -0.238 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 74.59 atmosphere 1000.0 10 > th dose independent rect. 1 9
3 75.40 atmosphere 995.0 270 > th dose independent rect. 13 6
5 75.64 atmosphere 1000.0 10 > th dose independent rect. 16 18
7 75.81 temperature 20.0 270 > th dose independent rect. 13 6
11 75.99 atmosphere 995.0 270 > th dose independent rect. 14 4
13 76.05 temperature 15.0 270 > th dose independent rect. 19 18
16 76.10 precipitation 0.1 270 < th dose independent rect. 17 22
17 76.10 precipitation 0.1 270 < th dose dependent rect. 17 22
21 76.16 temperature 20.0 270 > th dose independent rect. 14 4
22 76.18 radiation 40.0 90 < th dose dependent rect. 13 6
26 76.24 radiation 10.0 30 < th dose dependent rect. 5 14
27 76.27 humidity 50.0 270 > th dose dependent rect. 22 10
28 76.28 precipitation 0.1 270 < th dose independent rect. 19 18
29 76.28 precipitation 0.1 270 < th dose dependent rect. 19 18
34 76.47 radiation 40.0 90 < th dose dependent rect. 15 4
48 76.69 wind 9.0 270 < th dose independent rect. 19 18
49 76.70 humidity 90.0 270 < th dose independent rect. 15 2
50 76.70 humidity 50.0 90 > th dose dependent rect. 1 9
52 76.75 temperature 10.0 270 > th dose independent rect. 13 6
54 76.75 atmosphere 1010.0 270 < th dose independent rect. 13 6
57 76.75 atmosphere 995.0 270 > th dose independent rect. 19 18
58 76.81 radiation 30.0 90 < th dose independent rect. 15 4
59 76.81 wind 9.0 270 < th dose independent rect. 13 6
60 76.84 atmosphere 995.0 270 > th dose independent rect. 14 17
68 76.92 temperature 15.0 270 > th dose independent rect. 18 20
74 76.97 temperature 15.0 10 > th dose independent rect. 10 15
90 77.13 radiation 1.0 270 > th dose independent rect. 15 2
95 77.22 wind 9.0 270 < th dose independent rect. 18 20
101 77.30 temperature 10.0 270 > th dose independent rect. 14 4
105 77.30 atmosphere 1010.0 270 < th dose independent rect. 14 4
111 77.31 wind 9.0 270 < th dose independent rect. 14 4
125 77.38 precipitation 0.1 270 < th dose independent rect. 13 6
128 77.38 precipitation 0.1 270 < th dose dependent rect. 13 6
130 77.41 wind 1.0 90 > th dose independent rect. 15 4
132 77.41 radiation 20.0 90 < th dose dependent rect. 1 18
141 77.47 wind 1.0 270 > th dose independent rect. 13 6
149 77.53 radiation 1.0 270 > th dose independent rect. 7 7
153 77.54 wind 9.0 10 < th dose independent rect. 10 15
155 77.56 precipitation 0.1 270 < th dose independent rect. 14 3
159 77.56 atmosphere 995.0 270 > th dose independent rect. 18 20
160 77.56 precipitation 0.1 270 < th dose dependent rect. 14 3
162 77.58 atmosphere 1000.0 10 > th dose independent rect. 16 16
163 77.59 humidity 90.0 10 < th dose independent rect. 20 19
164 77.60 wind 1.0 270 > th dose independent rect. 15 2
175 77.61 temperature 15.0 270 > th dose independent rect. 8 15
189 77.68 humidity 50.0 270 > th dose independent rect. 19 18
192 77.69 radiation 20.0 10 < th dose dependent rect. 7 12
193 77.70 wind 9.0 10 < th dose independent rect. 1 9
194 77.70 temperature 10.0 10 > th dose independent rect. 1 9
196 77.70 humidity 50.0 10 > th dose independent rect. 1 9
198 77.70 atmosphere 1015.0 10 < th dose independent rect. 1 9
203 77.72 radiation 20.0 10 < th dose dependent sin 23 NA
244 77.94 temperature 10.0 1440 > th dose independent rect. 2 9
247 77.94 atmosphere 995.0 1440 > th dose independent rect. 2 9
248 77.94 temperature 10.0 1440 > th dose independent rect. 11 15
251 77.94 radiation 40.0 30 < th dose dependent rect. 14 20
255 77.97 precipitation 0.1 90 < th dose independent rect. 10 15
256 77.97 atmosphere 995.0 90 > th dose dependent rect. 15 4
257 77.97 precipitation 0.1 90 < th dose dependent rect. 10 15
273 78.04 precipitation 0.1 270 < th dose independent rect. 7 7
274 78.04 precipitation 0.1 270 < th dose dependent rect. 7 7
280 78.09 precipitation 0.1 270 < th dose independent rect. 8 15
281 78.09 humidity 90.0 10 < th dose independent rect. 23 16
282 78.09 atmosphere 995.0 270 > th dose independent rect. 1 17
284 78.09 precipitation 0.1 270 < th dose dependent rect. 8 15
290 78.11 wind 9.0 270 < th dose independent rect. 7 7
294 78.13 temperature 10.0 270 > th dose independent rect. 7 7
295 78.13 atmosphere 995.0 270 > th dose independent rect. 7 7
296 78.13 atmosphere 1015.0 270 < th dose independent rect. 7 7
297 78.13 temperature 10.0 270 > th dose independent rect. 14 17
304 78.15 humidity 70.0 270 > th dose independent rect. 23 9
305 78.15 radiation 1.0 270 > th dose independent rect. 4 10
338 78.19 radiation 40.0 270 < th dose independent rect. 23 9
342 78.20 wind 9.0 270 < th dose independent rect. 14 17
352 78.25 temperature 10.0 270 > th dose independent rect. 23 9
353 78.25 temperature 30.0 270 < th dose independent rect. 23 9
354 78.25 humidity 50.0 270 > th dose independent rect. 23 9
360 78.27 wind 9.0 270 < th dose independent rect. 23 9
366 78.31 humidity 90.0 270 < th dose independent rect. 13 6
369 78.31 radiation 1.0 270 < th dose dependent sin 15 NA
374 78.32 radiation 10.0 90 < th dose independent rect. 1 18
376 78.32 wind 1.0 90 > th dose independent rect. 19 20
383 78.34 temperature 10.0 270 > th dose dependent rect. 15 2
388 78.36 radiation 10.0 30 < th dose independent rect. 5 14
389 78.36 wind 9.0 270 < th dose independent rect. 8 15
399 78.40 temperature 10.0 270 > th dose dependent rect. 14 4
405 78.44 radiation 40.0 10 < th dose dependent rect. 13 7
429 78.53 atmosphere 995.0 10 > th dose independent rect. 15 5
431 78.53 wind 1.0 270 > th dose independent rect. 19 18
435 78.54 precipitation 0.1 90 < th dose independent rect. 1 9
436 78.54 precipitation 0.1 90 < th dose dependent rect. 1 9
442 78.56 temperature 10.0 270 > th dose dependent rect. 13 6
444 78.57 radiation 1.0 270 < th dose independent sin 15 NA
445 78.57 temperature 15.0 270 > th dose independent rect. 18 7
484 78.68 wind 1.0 270 > th dose independent rect. 7 7
490 78.69 radiation 1.0 270 > th dose independent sin 15 NA
510 78.73 radiation 40.0 270 < th dose independent rect. 14 17
546 78.79 humidity 90.0 90 < th dose independent rect. 19 20
547 78.79 atmosphere 1000.0 30 > th dose independent rect. 12 22
567 78.84 atmosphere 995.0 270 > th dose dependent rect. 13 6
601 78.89 humidity 50.0 90 > th dose independent rect. 15 4
603 78.89 humidity 60.0 270 > th dose independent rect. 18 7
614 78.91 temperature 30.0 270 < th dose independent rect. 18 7
630 78.93 humidity 90.0 270 < th dose independent rect. 19 18
669 79.00 radiation 10.0 10 > th dose independent rect. 10 6
679 79.01 radiation 10.0 10 < th dose independent rect. 7 12
684 79.01 atmosphere 995.0 270 > th dose dependent rect. 15 2
716 79.04 wind 9.0 270 < th dose dependent rect. 13 6
754 79.08 temperature 30.0 270 < th dose independent rect. 19 17
770 79.12 radiation 1.0 270 < th dose dependent rect. 18 7
773 79.13 temperature 15.0 10 > th dose independent rect. 20 19
782 79.16 precipitation 0.1 270 < th dose independent rect. 23 9
786 79.16 precipitation 0.1 270 < th dose dependent rect. 23 9
794 79.17 wind 1.0 270 > th dose independent rect. 18 8
826 79.22 radiation 1.0 270 < th dose independent rect. 18 7
829 79.23 radiation 10.0 10 > th dose independent sin 23 NA
839 79.24 radiation 1.0 270 < th dose dependent rect. 16 9
840 79.25 wind 9.0 270 < th dose independent rect. 18 7
850 79.26 radiation 20.0 270 < th dose independent rect. 18 7
854 79.26 temperature 10.0 270 > th dose independent rect. 1 17
855 79.26 atmosphere 1015.0 270 < th dose independent rect. 1 17
861 79.27 radiation 30.0 270 < th dose dependent rect. 18 7
888 79.31 atmosphere 1015.0 270 < th dose independent rect. 14 17
890 79.31 precipitation 0.1 10 < th dose independent rect. 20 19
891 79.31 precipitation 0.1 10 < th dose dependent rect. 20 19
896 79.32 precipitation 0.1 270 < th dose independent rect. 18 7
900 79.32 precipitation 0.1 270 < th dose dependent rect. 18 7
936 79.36 radiation 40.0 270 < th dose dependent rect. 23 9
947 79.39 humidity 80.0 10 < th dose independent rect. 10 6
960 79.41 wind 9.0 270 < th dose independent rect. 1 17
961 79.41 wind 9.0 270 < th dose dependent rect. 15 2
972 79.43 wind 9.0 90 < th dose dependent rect. 15 4
985 79.45 radiation 1.0 270 < th dose independent rect. 16 9
997 79.47 humidity 50.0 270 > th dose independent rect. 7 7