Os01g0832000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidate cytidylyltransferase family protein.
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Os01g0832000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidate cytidylyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.09 | 0.27 | 10.9 | 0.82 | 0.772 | 0.462 | -0.0325 | -6.44 | -0.00531 | 18.2 | 29.96 | 4031 | -- | -- |
| 38.25 | 0.29 | 11 | -0.209 | 0.718 | -0.161 | -0.0983 | -- | -0.0969 | 18.5 | 29.96 | 4031 | -- | -- |
| 33.09 | 0.268 | 10.9 | 0.828 | 0.772 | 0.468 | -- | -6.51 | -0.00391 | 18.2 | 29.9 | 4003 | -- | -- |
| 34.89 | 0.277 | 11 | -0.26 | 0.658 | -0.265 | -- | -- | -0.151 | 19.2 | 27.3 | 47476 | -- | -- |
| 62.99 | 0.37 | 10.9 | 0.769 | -- | 0.451 | -- | -6.35 | -0.0776 | -- | 31.6 | 4966 | -- | -- |
| 39.1 | 0.293 | 11 | -0.188 | 0.749 | -- | -0.0571 | -- | -0.102 | 18.3 | -- | -- | -- | -- |
| 39.11 | 0.293 | 11 | -0.188 | 0.749 | -- | -- | -- | -0.102 | 18.3 | -- | -- | -- | -- |
| 57.08 | 0.353 | 11 | -0.294 | -- | -0.355 | -- | -- | -0.177 | -- | 27.3 | 47476 | -- | -- |
| 36.61 | 0.283 | 11 | -- | 0.669 | -0.235 | -- | -- | -0.117 | 19 | 27.3 | 47476 | -- | -- |
| 68.2 | 0.386 | 11 | -0.208 | -- | -- | -- | -- | -0.119 | -- | -- | -- | -- | -- |
| 40.04 | 0.296 | 11 | -- | 0.751 | -- | -- | -- | -0.0815 | 18.3 | -- | -- | -- | -- |
| 59.31 | 0.36 | 11 | -- | -- | -0.334 | -- | -- | -0.142 | -- | 27.3 | 47476 | -- | -- |
| 69.34 | 0.389 | 11 | -- | -- | -- | -- | -- | -0.0956 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.33 | humidity | 80 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 3 | 32.72 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 18 | 32.75 | temperature | 30 | 4320 | < th | dose independent | rect. | 5 | 9 |
| 20 | 32.75 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 12 |
| 21 | 32.76 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 6 |
| 28 | 32.77 | temperature | 30 | 4320 | < th | dose independent | rect. | 22 | 16 |
| 36 | 32.81 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 73 | 32.91 | temperature | 30 | 1440 | > th | dose independent | sin | 7 | NA |
| 74 | 32.91 | temperature | 30 | 4320 | < th | dose independent | sin | 7 | NA |
| 85 | 32.98 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 204 | 33.15 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 10 |
| 242 | 33.21 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 249 | 33.23 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 5 |
| 312 | 33.29 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 342 | 33.31 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 365 | 33.36 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 7 |
| 427 | 33.42 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 17 |
| 432 | 33.42 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 19 |
| 446 | 33.43 | temperature | 30 | 4320 | < th | dose independent | no | NA | NA |
| 513 | 33.43 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 22 |
| 560 | 33.44 | temperature | 30 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 563 | 33.45 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 567 | 33.45 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 609 | 33.47 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 624 | 33.49 | temperature | 30 | 4320 | > th | dose independent | no | NA | NA |
| 828 | 33.52 | temperature | 30 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 834 | 33.53 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 23 |
| 992 | 33.57 | temperature | 30 | 4320 | > th | dose dependent | sin | 7 | NA |