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Os01g0830300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0194) R2 : 8.87e-06
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0026 (0.0408) R2dN8 : 1.15e-05 R2N8 : 8.87e-06
σ : 0.365
deviance : 61.16
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.74 0.281 11.2 -0.623 0.5 0.564 -0.111 -0.102 -0.0654 13.7 1.309e-05 34 -- --
35.76 0.279 11.2 -0.619 0.503 0.565 -0.0124 -- -0.0678 13.7 0.009977 33 -- --
35.76 0.279 11.2 -0.63 0.5 0.568 -- -0.0482 -0.0627 13.7 0.009646 33 -- --
35.76 0.278 11.2 -0.626 0.5 0.564 -- -- -0.0684 13.7 1.106e-05 33 -- --
41.11 0.299 11.2 -0.7 -- 0.249 -- -0.0786 -0.0598 -- 0.03962 29 -- --
42.54 0.306 11.2 -0.701 0.317 -- -0.0785 -- -0.0775 20.7 -- -- -- --
42.56 0.305 11.2 -0.699 0.317 -- -- -- -0.0776 20.7 -- -- -- --
41.06 0.298 11.2 -0.673 -- 0.254 -- -- -0.0717 -- 3.169e-06 33 -- --
46.41 0.317 11.2 -- 0.516 0.546 -- -- -0.0376 13.8 2.089e-06 33 -- --
48.26 0.325 11.2 -0.699 -- -- -- -- -0.0802 -- -- -- -- --
55.42 0.348 11.2 -- 0.32 -- -- -- 0.000235 20.6 -- -- -- --
53.08 0.339 11.1 -- -- 0.275 -- -- -0.00281 -- 0.007321 33 -- --
61.16 0.365 11.1 -- -- -- -- -- -0.0026 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.93 radiation 1.0 30 > th dose independent rect. 16 17
2 31.22 radiation 1.0 30 > th dose independent rect. 14 19
3 31.25 humidity 60.0 270 > th dose independent rect. 17 10
4 31.35 radiation 10.0 270 < th dose independent rect. 17 10
5 31.42 temperature 30.0 270 < th dose independent rect. 17 10
7 31.46 radiation 20.0 270 < th dose dependent rect. 17 10
12 31.68 wind 7.0 270 < th dose independent rect. 17 10
13 31.68 precipitation 0.1 270 < th dose independent rect. 3 14
14 31.68 precipitation 0.1 270 < th dose dependent rect. 3 14
17 31.76 radiation 1.0 90 < th dose dependent sin 12 NA
18 31.84 humidity 50.0 270 > th dose independent rect. 7 20
19 31.89 temperature 10.0 270 > th dose independent rect. 17 10
23 31.89 temperature 10.0 270 > th dose independent rect. 3 14
24 31.89 atmosphere 1015.0 270 < th dose independent rect. 3 14
25 31.92 radiation 1.0 90 < th dose independent sin 12 NA
26 31.93 radiation 1.0 90 > th dose independent sin 12 NA
27 32.01 radiation 30.0 90 < th dose independent rect. 4 5
33 32.13 temperature 10.0 270 > th dose dependent rect. 4 2
37 32.21 atmosphere 995.0 270 > th dose independent rect. 17 10
38 32.21 humidity 50.0 270 > th dose dependent rect. 3 4
39 32.23 wind 9.0 270 < th dose independent rect. 7 20
42 32.27 precipitation 0.1 270 < th dose independent rect. 17 10
43 32.27 precipitation 0.1 270 < th dose dependent rect. 17 10
44 32.30 radiation 40.0 30 < th dose independent rect. 14 19
45 32.31 precipitation 0.1 270 < th dose independent rect. 3 4
46 32.31 precipitation 0.1 270 < th dose dependent rect. 3 4
48 32.32 temperature 10.0 270 > th dose dependent rect. 3 4
50 32.33 radiation 30.0 270 < th dose dependent rect. 3 4
53 32.36 precipitation 0.1 30 < th dose independent rect. 14 19
55 32.36 precipitation 0.1 30 < th dose dependent rect. 14 19
58 32.39 radiation 10.0 270 < th dose independent rect. 4 2
61 32.41 temperature 10.0 1440 > th dose independent rect. 10 5
64 32.41 radiation 1.0 30 > th dose independent rect. 9 5
65 32.41 temperature 10.0 1440 > th dose independent rect. 15 19
69 32.42 humidity 70.0 270 > th dose independent rect. 3 4
72 32.42 radiation 10.0 270 < th dose dependent rect. 4 2
75 32.44 temperature 10.0 30 > th dose independent rect. 9 5
77 32.44 temperature 30.0 90 < th dose independent rect. 4 5
78 32.44 atmosphere 995.0 30 > th dose independent rect. 9 5
79 32.44 atmosphere 1015.0 30 < th dose independent rect. 9 5
80 32.44 precipitation 0.1 30 < th dose independent rect. 9 5
83 32.44 temperature 10.0 30 > th dose independent rect. 14 19
85 32.44 precipitation 0.1 30 < th dose dependent rect. 9 5
86 32.45 wind 7.0 270 < th dose independent rect. 3 4
89 32.46 wind 9.0 270 < th dose independent rect. 3 14
91 32.47 temperature 10.0 270 > th dose independent rect. 3 4
94 32.47 humidity 50.0 270 > th dose independent rect. 3 4
96 32.47 atmosphere 995.0 270 > th dose independent rect. 3 4
97 32.47 atmosphere 1015.0 270 < th dose independent rect. 3 4
100 32.47 wind 9.0 30 < th dose independent rect. 9 5
102 32.47 temperature 10.0 270 > th dose independent rect. 7 20
106 32.49 humidity 50.0 270 > th dose independent rect. 6 22
107 32.50 wind 9.0 270 < th dose independent rect. 6 22
111 32.51 wind 9.0 90 < th dose independent rect. 9 19
124 32.56 wind 9.0 30 < th dose independent rect. 14 19
126 32.57 wind 1.0 30 > th dose independent rect. 9 5
136 32.64 radiation 1.0 30 > th dose independent rect. 5 4
149 32.66 humidity 50.0 270 > th dose dependent rect. 4 2
153 32.68 precipitation 0.1 270 < th dose independent rect. 4 2
155 32.68 precipitation 0.1 270 < th dose dependent rect. 4 2
160 32.70 atmosphere 1010.0 270 < th dose independent rect. 4 2
173 32.73 temperature 10.0 90 > th dose independent rect. 9 19
178 32.76 wind 7.0 270 < th dose independent rect. 4 2
180 32.76 temperature 10.0 270 > th dose independent rect. 4 2
182 32.76 temperature 30.0 270 < th dose independent rect. 4 2
183 32.76 humidity 50.0 270 > th dose independent rect. 4 2
186 32.76 atmosphere 995.0 270 > th dose independent rect. 4 2
193 32.76 temperature 10.0 270 > th dose independent rect. 6 22
219 32.84 radiation 1.0 30 > th dose independent rect. 12 21
222 32.85 atmosphere 995.0 30 > th dose independent rect. 14 19
225 32.86 precipitation 0.1 270 < th dose independent rect. 7 20
226 32.86 precipitation 0.1 270 < th dose dependent rect. 7 20
240 32.90 atmosphere 995.0 270 > th dose independent rect. 3 14
245 32.93 wind 9.0 270 < th dose dependent rect. 3 4
249 32.94 wind 9.0 10 < th dose independent rect. 9 7
250 32.94 temperature 10.0 10 > th dose independent rect. 9 7
252 32.94 atmosphere 1015.0 10 < th dose independent rect. 9 7
253 32.94 precipitation 0.1 10 < th dose independent rect. 9 7
255 32.94 temperature 10.0 10 > th dose independent rect. 16 17
259 32.94 precipitation 0.1 10 < th dose dependent rect. 9 7
264 32.96 atmosphere 995.0 10 > th dose independent rect. 9 7
265 32.96 radiation 40.0 10 < th dose independent rect. 16 17
287 33.02 temperature 10.0 1440 > th dose independent rect. 5 5
290 33.02 atmosphere 995.0 1440 > th dose independent rect. 5 5
291 33.02 atmosphere 1015.0 1440 < th dose independent rect. 5 5
292 33.02 radiation 1.0 10 > th dose independent rect. 9 7
293 33.02 temperature 10.0 1440 > th dose independent rect. 10 19
302 33.04 wind 9.0 270 < th dose independent rect. 7 6
329 33.07 wind 9.0 10 < th dose independent rect. 16 17
342 33.08 precipitation 0.1 270 < th dose independent rect. 7 6
346 33.08 precipitation 0.1 270 < th dose dependent rect. 7 6
348 33.09 temperature 10.0 270 > th dose independent rect. 7 6
349 33.09 atmosphere 995.0 270 > th dose independent rect. 7 6
350 33.09 atmosphere 1015.0 270 < th dose independent rect. 7 6
358 33.12 humidity 50.0 30 > th dose independent rect. 9 5
359 33.12 radiation 1.0 270 > th dose independent rect. 7 6
361 33.12 atmosphere 995.0 90 > th dose independent rect. 9 19
373 33.15 humidity 90.0 30 < th dose independent rect. 9 5
383 33.16 humidity 50.0 270 > th dose independent rect. 7 6
405 33.21 precipitation 0.1 90 < th dose independent rect. 9 19
406 33.21 precipitation 0.1 90 < th dose dependent rect. 9 19
408 33.22 atmosphere 995.0 10 > th dose independent rect. 16 17
409 33.22 wind 9.0 90 < th dose dependent rect. 9 19
454 33.29 precipitation 0.1 270 < th dose independent rect. 12 20
456 33.29 precipitation 0.1 270 < th dose dependent rect. 12 20
468 33.32 radiation 20.0 270 < th dose independent rect. 2 6
469 33.32 wind 1.0 10 > th dose independent rect. 9 7
472 33.32 atmosphere 995.0 270 > th dose independent rect. 7 20
474 33.33 humidity 50.0 270 > th dose independent rect. 8 4
486 33.34 wind 9.0 270 < th dose dependent rect. 4 2
515 33.37 humidity 50.0 270 > th dose independent rect. 9 1
525 33.38 temperature 10.0 270 > th dose independent rect. 12 20
532 33.40 wind 9.0 270 < th dose independent rect. 9 1
553 33.41 temperature 10.0 270 > th dose independent rect. 9 1
554 33.41 atmosphere 995.0 270 > th dose independent rect. 9 1
555 33.41 atmosphere 1015.0 270 < th dose independent rect. 9 1
556 33.41 precipitation 0.1 270 < th dose independent rect. 9 1
558 33.41 temperature 30.0 270 < th dose independent rect. 7 20
559 33.41 temperature 10.0 270 > th dose independent rect. 10 23
560 33.41 precipitation 0.1 270 < th dose dependent rect. 9 1
589 33.49 atmosphere 1015.0 90 < th dose independent rect. 9 19
621 33.55 temperature 10.0 30 > th dose dependent rect. 14 19
642 33.61 radiation 1.0 10 > th dose dependent rect. 9 5
660 33.64 radiation 1.0 270 > th dose independent rect. 9 1
675 33.65 wind 9.0 270 < th dose independent rect. 12 20
678 33.66 temperature 10.0 30 > th dose dependent rect. 9 5
679 33.67 wind 1.0 270 > th dose independent rect. 3 4
706 33.70 atmosphere 1015.0 270 < th dose independent rect. 7 20
711 33.70 wind 9.0 270 < th dose dependent rect. 7 20
712 33.71 wind 1.0 270 > th dose independent rect. 9 1
768 33.75 atmosphere 995.0 90 > th dose dependent rect. 4 5
795 33.78 atmosphere 1015.0 10 < th dose dependent rect. 9 5
820 33.82 radiation 40.0 10 < th dose independent rect. 5 15
821 33.82 wind 9.0 270 < th dose dependent rect. 7 6
836 33.86 wind 1.0 270 > th dose independent rect. 7 6
864 33.89 humidity 50.0 10 > th dose independent rect. 16 17
866 33.89 atmosphere 995.0 270 > th dose dependent rect. 4 2
881 33.90 atmosphere 1015.0 30 < th dose independent rect. 14 19
885 33.91 wind 1.0 30 > th dose independent rect. 4 5
898 33.92 wind 9.0 270 < th dose dependent rect. 8 4
904 33.93 atmosphere 995.0 270 > th dose independent rect. 12 20
907 33.93 wind 9.0 90 < th dose dependent rect. 9 6