Os01g0829600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0829600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 430.25 | 0.975 | 6.48 | -3.17 | 2.42 | -3.95 | -0.898 | 0.221 | -1.13 | 2.15 | 0.85 | 95 | 4.77 | 22.8 |
| 430.21 | 0.966 | 6.47 | -3.15 | 2.43 | -3.96 | -0.668 | -- | -1.13 | 2.16 | 0.8597 | 95 | 4.76 | 22.8 |
| 431.89 | 0.968 | 6.47 | -3.13 | 2.52 | -4.05 | -- | -0.1 | -1.11 | 2 | 0.8588 | 94 | 4.77 | 22.8 |
| 431.78 | 0.968 | 6.47 | -3.14 | 2.46 | -3.98 | -- | -- | -1.13 | 2.16 | 0.852 | 95 | 4.74 | 22.8 |
| 545.36 | 1.09 | 6.48 | -3.09 | -- | -2.57 | -- | 0.099 | -0.836 | -- | 0.61 | 57 | 4.83 | 22.8 |
| 652.05 | 1.2 | 6.32 | -2.83 | 2.77 | -- | 0.33 | -- | -0.828 | 9.68 | -- | -- | -- | -- |
| 652.45 | 1.2 | 6.32 | -2.82 | 2.77 | -- | -- | -- | -0.828 | 9.67 | -- | -- | -- | -- |
| 515.53 | 1.06 | 6.46 | -3.01 | -- | -2.47 | -- | -- | -0.952 | -- | 0.9393 | 58 | 5.23 | 22.2 |
| 686.26 | 1.22 | 6.38 | -- | 2.36 | -3.83 | -- | -- | -0.793 | 2.36 | 0.9374 | 90 | 4.75 | 22.9 |
| 1109 | 1.56 | 6.4 | -2.84 | -- | -- | -- | -- | -0.823 | -- | -- | -- | -- | -- |
| 862.06 | 1.37 | 6.25 | -- | 2.78 | -- | -- | -- | -0.513 | 9.75 | -- | -- | -- | -- |
| 757 | 1.28 | 6.24 | -- | -- | -2.41 | -- | -- | -0.528 | -- | 0.9354 | 50 | 5.1 | 22.5 |
| 1322.37 | 1.7 | 6.32 | -- | -- | -- | -- | -- | -0.507 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 450.29 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 3 | 452.14 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 4 | 452.63 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 60 | 460.23 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 90 | 461.99 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 99 | 462.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 112 | 462.76 | humidity | 50 | 1440 | > th | dose dependent | rect. | 10 | 12 |
| 114 | 462.80 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 12 |
| 130 | 463.20 | radiation | 1 | 90 | < th | dose independent | rect. | 5 | 23 |
| 156 | 463.76 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 198 | 464.55 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 15 |
| 200 | 464.60 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 202 | 464.64 | humidity | 90 | 1440 | < th | dose dependent | rect. | 10 | 11 |
| 208 | 464.73 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 215 | 464.86 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 281 | 465.83 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 305 | 466.31 | humidity | 90 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 325 | 466.59 | humidity | 90 | 1440 | < th | dose dependent | sin | 21 | NA |
| 377 | 467.21 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 408 | 467.60 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 417 | 467.69 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 491 | 469.02 | radiation | 1 | 1440 | < th | dose dependent | sin | 13 | NA |
| 512 | 469.53 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 20 |
| 526 | 469.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 530 | 469.80 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 548 | 470.14 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 550 | 470.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 562 | 470.47 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 579 | 470.62 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 584 | 470.69 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 587 | 470.71 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 594 | 470.79 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 596 | 470.80 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 599 | 470.81 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 602 | 470.84 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 649 | 471.08 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 670 | 471.20 | radiation | 1 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 671 | 471.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 18 |
| 679 | 471.29 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 760 | 472.06 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 928 | 474.07 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 929 | 474.10 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 985 | 474.84 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 987 | 474.86 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 22 |