Os01g0828300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os01g0828300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.13 | 0.519 | 6.25 | 1.25 | 0.392 | -1.32 | -0.133 | -0.645 | -0.0331 | 3.76 | 23.75 | 1278 | -- | -- |
| 122.55 | 0.516 | 6.27 | 1.15 | 0.393 | -1.23 | -0.0319 | -- | -0.0446 | 3.75 | 23.7 | 1258 | -- | -- |
| 122.14 | 0.515 | 6.25 | 1.25 | 0.393 | -1.36 | -- | -0.669 | -0.027 | 3.75 | 23.47 | 1271 | -- | -- |
| 122.55 | 0.516 | 6.27 | 1.15 | 0.392 | -1.24 | -- | -- | -0.0488 | 3.85 | 23.7 | 1257 | -- | -- |
| 130.31 | 0.532 | 6.25 | 1.26 | -- | -1.42 | -- | -0.694 | -0.0253 | -- | 23.56 | 1210 | -- | -- |
| 141.38 | 0.557 | 6.22 | 1.51 | 0.453 | -- | -0.175 | -- | 0.178 | 3.49 | -- | -- | -- | -- |
| 141.48 | 0.557 | 6.22 | 1.51 | 0.453 | -- | -- | -- | 0.179 | 3.54 | -- | -- | -- | -- |
| 130.68 | 0.532 | 6.27 | 1.15 | -- | -1.29 | -- | -- | -0.0613 | -- | 24.06 | 1184 | -- | -- |
| 143.47 | 0.558 | 6.32 | -- | 0.375 | -1.62 | -- | -- | -0.271 | 3.58 | 23.2 | 8206 | -- | -- |
| 152.93 | 0.578 | 6.22 | 1.53 | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
| 201.69 | 0.664 | 6.25 | -- | 0.483 | -- | -- | -- | 0.0105 | 3.52 | -- | -- | -- | -- |
| 145.97 | 0.563 | 6.33 | -- | -- | -1.37 | -- | -- | -0.303 | -- | 21.8 | 47520 | -- | -- |
| 214.72 | 0.684 | 6.25 | -- | -- | -- | -- | -- | 0.021 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.46 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 5 | 122.08 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 7 | 122.13 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 9 | 122.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 32 | 122.82 | temperature | 15 | 30 | > th | dose independent | rect. | 3 | 23 |
| 59 | 123.05 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 70 | 123.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 17 |
| 81 | 123.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 146 | 123.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 225 | 123.52 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 242 | 123.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 243 | 123.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 246 | 123.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 257 | 123.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 331 | 123.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 343 | 124.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 350 | 124.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 351 | 124.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 357 | 124.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 360 | 124.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 18 |
| 362 | 124.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 530 | 124.35 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 581 | 124.44 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 662 | 124.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 665 | 124.57 | temperature | 30 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 719 | 124.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 19 |
| 729 | 124.66 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 743 | 124.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 20 |
| 773 | 124.72 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 22 | 8 |
| 777 | 124.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 820 | 124.80 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 833 | 124.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 14 |
| 850 | 124.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 956 | 124.96 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 957 | 124.97 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |