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Os01g0826000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Heavy metal transport/detoxification protein domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0392) R2 : 0.585
β1 : 2.19 (0.144) R2dD : 0.232 R2D : 0.303
β2 : 2.44 (0.274) R2dC : 0.56 R2C : 0.103
β3 : 1.49 (0.358) R2dE : 0.121 R2E : -0.347
β4 : -7.01 (0.952) R2dD*C : 0.231 R2D*C : -0.233
β5 : -10.3 (1.3) R2dD*E : 0.269 R2D*E : -0.0751
γ1 : -0.0977 (0.0829) R2dN8 : 0.00176 R2N8 : 0.00346
σ : 0.719
deviance : 234.09
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_____
C
peak time of C : 7.11
E
wheather : radiation
threshold : 0.9566
memory length : 777
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
234.09 0.719 11.2 2.19 2.44 1.49 -7.01 -10.3 -0.0977 7.11 0.9566 777 -- --
270.9 0.772 11.2 2.57 1.51 -0.0899 -1.15 -- 0.0645 8.38 0.9566 777 -- --
259.65 0.756 11.2 2.5 1.38 0.0897 -- -1.51 0.0535 7.77 0.1426 772 -- --
256.42 0.746 11.2 2.71 1.39 -0.571 -- -- 0.15 7.72 42.73 11951 -- --
335.63 0.853 11.2 2.63 -- -1.05 -- -0.879 0.239 -- 40.16 637 -- --
271.13 0.772 11.2 2.57 1.44 -- -1.08 -- 0.0618 8.18 -- -- -- --
274.46 0.776 11.2 2.53 1.45 -- -- -- 0.0608 8.01 -- -- -- --
338.82 0.857 11.2 2.68 -- -1.08 -- -- 0.235 -- 40.33 637 -- --
350.44 0.872 11.1 -- 1.4 -1.68 -- -- -0.0224 8.01 49.83 29974 -- --
389.53 0.922 11.2 2.55 -- -- -- -- 0.0793 -- -- -- -- --
443.34 0.985 11.3 -- 1.47 -- -- -- -0.221 7.88 -- -- -- --
459 0.998 11.2 -- -- -1.84 -- -- -0.00484 -- 49.71 28648 -- --
560.44 1.1 11.3 -- -- -- -- -- -0.203 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 219.68 temperature 15 720 > th dose dependent rect. 3 6
3 219.90 temperature 10 720 > th dose dependent rect. 23 10
4 220.14 temperature 10 720 > th dose dependent rect. 1 8
6 220.36 temperature 10 720 > th dose dependent rect. 21 14
43 223.93 temperature 10 720 > th dose dependent rect. 21 16
46 224.14 temperature 20 720 > th dose independent rect. 22 11
49 224.36 humidity 60 14400 > th dose independent rect. 21 11
51 224.46 temperature 10 720 > th dose dependent sin 7 NA
69 225.29 temperature 30 720 < th dose dependent rect. 1 6
75 225.62 temperature 20 720 > th dose independent rect. 21 20
98 226.39 radiation 1 720 > th dose independent rect. 9 21
111 226.78 temperature 10 270 > th dose dependent rect. 3 14
126 227.26 atmosphere 995 43200 < th dose dependent rect. 14 10
137 227.43 humidity 60 270 > th dose dependent rect. 21 11
142 227.53 temperature 20 720 > th dose independent rect. 1 8
161 227.85 humidity 50 270 > th dose dependent sin 9 NA
170 228.05 atmosphere 995 43200 > th dose independent rect. 11 23
175 228.08 atmosphere 995 43200 < th dose independent rect. 11 23
178 228.11 atmosphere 995 43200 < th dose independent rect. 11 16
181 228.14 atmosphere 995 43200 < th dose independent rect. 12 14
182 228.16 temperature 20 720 < th dose independent rect. 2 1
191 228.29 atmosphere 995 43200 > th dose independent rect. 8 22
192 228.30 atmosphere 995 43200 > th dose independent rect. 9 20
194 228.31 wind 1 14400 > th dose independent rect. 21 2
197 228.36 atmosphere 995 43200 < th dose independent rect. 9 20
199 228.37 temperature 20 720 > th dose independent sin 7 NA
204 228.41 atmosphere 995 43200 < th dose independent rect. 9 23
206 228.41 atmosphere 995 43200 < th dose dependent rect. 13 12
208 228.43 atmosphere 995 43200 < th dose independent rect. 10 18
210 228.44 atmosphere 995 43200 > th dose independent rect. 11 16
215 228.45 wind 1 14400 < th dose independent rect. 20 3
216 228.45 atmosphere 995 43200 > th dose independent rect. 18 23
218 228.47 atmosphere 995 43200 > th dose independent no NA NA
230 228.54 atmosphere 995 43200 > th dose independent rect. 10 18
240 228.65 humidity 60 14400 > th dose independent rect. 21 1
258 228.84 atmosphere 995 43200 < th dose independent sin 17 NA
264 228.88 atmosphere 995 43200 < th dose independent rect. 18 23
265 228.90 atmosphere 995 43200 > th dose independent rect. 12 14
268 228.91 atmosphere 995 43200 < th dose independent rect. 21 20
277 228.94 atmosphere 995 43200 < th dose independent no NA NA
292 229.05 radiation 1 720 > th dose independent rect. 9 9
299 229.06 humidity 90 90 < th dose dependent rect. 20 18
333 229.39 atmosphere 995 43200 < th dose dependent rect. 12 14
341 229.43 atmosphere 995 43200 > th dose independent rect. 2 23
342 229.43 atmosphere 995 43200 > th dose independent rect. 4 23
356 229.53 atmosphere 995 43200 > th dose independent sin 17 NA
364 229.65 atmosphere 995 43200 < th dose independent rect. 13 12
386 229.84 atmosphere 995 43200 < th dose dependent rect. 13 20
418 230.08 temperature 20 720 < th dose independent rect. 23 10
450 230.39 atmosphere 995 43200 < th dose independent rect. 1 23
473 230.55 atmosphere 995 43200 < th dose dependent rect. 11 17
474 230.56 temperature 20 720 < th dose independent rect. 1 6
483 230.61 atmosphere 995 43200 > th dose independent sin 5 NA
486 230.65 temperature 20 720 < th dose independent rect. 23 8
501 230.73 radiation 1 1440 > th dose independent rect. 11 19
523 231.00 atmosphere 995 43200 < th dose dependent sin 16 NA
536 231.09 radiation 1 1440 < th dose dependent rect. 11 19
543 231.13 atmosphere 995 43200 < th dose independent sin 6 NA
548 231.16 humidity 80 270 < th dose independent rect. 24 12
570 231.30 humidity 80 90 < th dose independent rect. 21 17
584 231.38 atmosphere 995 43200 > th dose independent rect. 2 8
603 231.48 atmosphere 995 43200 > th dose independent rect. 5 3
611 231.53 atmosphere 995 43200 > th dose independent rect. 4 5
624 231.57 atmosphere 995 43200 < th dose independent rect. 2 8
629 231.57 atmosphere 995 43200 < th dose dependent rect. 1 8
638 231.65 atmosphere 995 43200 < th dose independent rect. 3 6
646 231.67 atmosphere 995 43200 < th dose dependent rect. 4 4
648 231.69 atmosphere 995 43200 < th dose dependent sin 9 NA
649 231.71 atmosphere 995 43200 > th dose independent rect. 1 10
650 231.71 radiation 1 720 < th dose independent rect. 21 22
651 231.72 humidity 80 14400 > th dose independent rect. 19 2
662 231.78 humidity 90 10 < th dose independent rect. 20 19
664 231.78 radiation 1 720 < th dose dependent rect. 21 21
670 231.84 atmosphere 995 43200 < th dose independent rect. 24 11
671 231.84 humidity 80 270 > th dose dependent rect. 11 21
700 232.00 humidity 80 90 < th dose independent rect. 9 5
716 232.09 atmosphere 995 43200 < th dose dependent rect. 21 13
723 232.11 humidity 80 270 > th dose independent rect. 23 9
739 232.21 atmosphere 995 43200 < th dose independent rect. 5 3
754 232.31 temperature 30 270 < th dose dependent rect. 19 19
759 232.33 temperature 30 720 < th dose dependent sin 8 NA
762 232.36 temperature 20 720 < th dose independent sin 8 NA
785 232.47 radiation 1 1440 < th dose independent rect. 11 19
903 233.13 radiation 10 1440 < th dose independent rect. 21 8
912 233.20 humidity 50 10 > th dose dependent rect. 21 23
957 233.43 radiation 1 1440 > th dose independent rect. 11 8
997 233.58 radiation 1 1440 < th dose independent rect. 9 2
1000 233.58 radiation 1 1440 < th dose dependent rect. 9 2