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Os01g0825500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Nodulin-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0323) R2 : 0.932
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.24 (0.142) R2dC : 0.249 R2C : 0.67
β3 : -2.86 (0.123) R2dE : 0.259 R2E : 0.681
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.275 (0.0676) R2dN8 : 0.00365 R2N8 : 0.000737
σ : 0.603
deviance : 167.6
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_____
C
peak time of C : 9.27
E
wheather : radiation
threshold : 0.93
memory length : 46
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 8.13
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
163.68 0.601 10.9 -0.0819 3.18 -2.88 2.4 2.33 -0.284 9.26 0.8597 34 7.94 --
167.86 0.603 10.9 0.0174 3.17 -2.9 -0.00746 -- -0.305 9.2 0.943 43 8.05 --
167.29 0.602 10.9 0.0196 3.12 -2.96 -- 0.488 -0.289 9.22 0.851 39 8.02 --
167.69 0.603 10.9 0.0679 3.21 -2.88 -- -- -0.286 9.22 0.9308 44 8.05 --
248.69 0.734 11 0.19 -- -5.89 -- 0.345 -0.287 -- 39.62 73 8.51 --
250.67 0.742 10.8 0.179 6.01 -- -0.362 -- -0.214 10.2 -- -- -- --
251.19 0.742 10.8 0.165 6.02 -- -- -- -0.215 10.2 -- -- -- --
248.96 0.735 11 0.195 -- -5.9 -- -- -0.288 -- 39.6 73 8.51 --
167.6 0.603 10.9 -- 3.24 -2.86 -- -- -0.275 9.27 0.93 46 8.13 --
2446.16 2.31 11 0.0794 -- -- -- -- -0.227 -- -- -- -- --
251.9 0.742 10.8 -- 6.02 -- -- -- -0.233 10.2 -- -- -- --
249.97 0.736 11 -- -- -5.89 -- -- -0.302 -- 39.6 73 8.51 --
2446.33 2.31 11 -- -- -- -- -- -0.235 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 162.75 radiation 1.0 90 < th dose independent rect. 5 23
2 163.86 radiation 1.0 90 > th dose independent rect. 12 18
3 164.65 radiation 1.0 30 < th dose dependent sin 14 NA
5 165.27 radiation 1.0 30 < th dose independent sin 14 NA
7 165.85 radiation 1.0 90 < th dose dependent rect. 5 23
11 167.26 radiation 1.0 90 < th dose independent rect. 14 14
12 167.27 radiation 1.0 30 > th dose independent sin 14 NA
19 168.50 radiation 1.0 90 < th dose independent rect. 9 19
22 168.52 radiation 1.0 90 < th dose independent rect. 11 17
29 169.88 radiation 1.0 90 < th dose dependent rect. 14 14
33 170.55 radiation 1.0 90 < th dose independent rect. 17 11
37 171.12 radiation 1.0 90 < th dose dependent rect. 9 19
39 171.15 radiation 1.0 90 < th dose dependent rect. 11 17
42 171.45 humidity 50.0 270 > th dose independent rect. 16 10
49 172.65 temperature 20.0 90 > th dose independent rect. 18 10
51 172.85 radiation 40.0 270 < th dose dependent rect. 15 11
52 172.98 radiation 1.0 90 < th dose dependent rect. 17 11
62 173.69 radiation 20.0 270 < th dose independent rect. 15 11
76 175.84 temperature 10.0 90 > th dose dependent rect. 18 10
98 177.29 radiation 1.0 270 > th dose independent rect. 10 20
113 177.70 precipitation 0.1 270 < th dose independent rect. 2 14
114 177.70 precipitation 0.1 270 < th dose dependent rect. 2 14
118 177.84 temperature 15.0 90 > th dose dependent rect. 12 7
132 179.42 temperature 30.0 270 < th dose independent rect. 16 10
137 179.50 radiation 1.0 90 > th dose independent rect. 12 7
167 180.52 temperature 30.0 90 < th dose independent rect. 18 10
171 180.74 precipitation 0.1 90 < th dose independent rect. 4 14
172 180.74 precipitation 0.1 90 < th dose dependent rect. 4 14
175 180.98 atmosphere 1015.0 270 < th dose independent rect. 16 10
178 181.09 humidity 60.0 90 > th dose independent rect. 18 10
182 181.26 temperature 10.0 270 > th dose independent rect. 16 10
184 181.26 temperature 10.0 270 > th dose independent rect. 2 14
185 181.26 atmosphere 1015.0 270 < th dose independent rect. 2 14
194 181.63 temperature 15.0 270 > th dose dependent rect. 12 4
196 181.74 atmosphere 1015.0 90 < th dose independent rect. 18 10
218 182.11 humidity 90.0 90 < th dose dependent rect. 12 7
251 182.72 humidity 90.0 10 < th dose independent rect. 12 7
257 182.89 temperature 20.0 90 > th dose independent rect. 18 18
260 182.93 atmosphere 1015.0 270 < th dose independent rect. 7 14
262 183.17 wind 9.0 270 < th dose independent rect. 2 14
270 183.37 wind 9.0 270 < th dose independent rect. 16 10
277 183.55 wind 7.0 270 < th dose independent rect. 21 10
284 183.85 precipitation 0.1 270 < th dose independent rect. 11 19
285 183.85 precipitation 0.1 270 < th dose dependent rect. 11 19
292 184.07 humidity 50.0 270 > th dose independent rect. 6 14
296 184.21 temperature 10.0 90 > th dose dependent rect. 4 14
303 184.51 humidity 50.0 270 > th dose independent rect. 16 19
323 185.13 temperature 30.0 270 < th dose independent rect. 6 14
326 185.16 precipitation 0.1 270 < th dose independent rect. 10 21
327 185.16 precipitation 0.1 270 < th dose dependent rect. 10 21
328 185.17 atmosphere 995.0 270 > th dose independent rect. 16 10
331 185.21 humidity 50.0 270 > th dose independent rect. 15 21
342 185.55 atmosphere 1015.0 270 < th dose independent rect. 17 18
343 185.55 temperature 30.0 270 < th dose independent rect. 16 19
355 186.00 temperature 10.0 90 > th dose independent rect. 18 10
357 186.00 radiation 20.0 90 < th dose independent rect. 18 10
360 186.00 temperature 10.0 90 > th dose independent rect. 4 14
361 186.00 atmosphere 1015.0 90 < th dose independent rect. 4 14
362 186.03 atmosphere 995.0 90 > th dose independent rect. 18 10
376 186.35 wind 9.0 90 < th dose independent rect. 18 10
379 186.37 precipitation 0.1 270 < th dose independent rect. 21 10
380 186.37 precipitation 0.1 270 < th dose dependent rect. 21 10
389 186.53 temperature 25.0 90 > th dose independent rect. 12 6
409 187.05 atmosphere 1015.0 30 < th dose independent rect. 19 17
412 187.28 atmosphere 995.0 270 > th dose independent rect. 2 14
418 187.46 wind 9.0 90 < th dose independent rect. 4 14
425 187.64 humidity 90.0 30 < th dose dependent rect. 12 19
456 188.06 temperature 10.0 90 > th dose dependent rect. 19 17
457 188.10 radiation 20.0 270 < th dose independent rect. 21 10
464 188.21 temperature 10.0 270 > th dose independent rect. 21 10
465 188.21 temperature 30.0 270 < th dose independent rect. 21 10
466 188.21 humidity 50.0 270 > th dose independent rect. 21 10
468 188.21 atmosphere 995.0 270 > th dose independent rect. 21 10
471 188.21 temperature 10.0 270 > th dose independent rect. 7 14
516 188.80 radiation 40.0 270 < th dose dependent rect. 21 10
552 189.56 atmosphere 1015.0 270 < th dose independent rect. 16 20
564 189.81 wind 9.0 270 < th dose independent rect. 7 14
616 190.65 precipitation 0.1 90 < th dose independent rect. 12 6
617 190.65 precipitation 0.1 90 < th dose dependent rect. 12 6
623 190.77 temperature 10.0 1440 > th dose independent rect. 19 10
626 190.77 temperature 30.0 1440 < th dose independent rect. 19 10
630 190.77 humidity 50.0 1440 > th dose independent rect. 19 10
632 190.77 atmosphere 995.0 1440 > th dose independent rect. 19 10
633 190.77 radiation 20.0 1440 < th dose independent rect. 19 10
645 190.77 temperature 10.0 1440 > th dose independent rect. 5 14
659 190.94 precipitation 0.1 270 < th dose independent rect. 16 10
660 190.94 precipitation 0.1 270 < th dose dependent rect. 16 10
669 190.98 wind 9.0 270 < th dose independent rect. 6 5
673 191.00 humidity 50.0 270 > th dose independent rect. 6 5
681 191.02 temperature 10.0 270 > th dose independent rect. 6 5
682 191.02 atmosphere 995.0 270 > th dose independent rect. 6 5
683 191.02 atmosphere 1015.0 270 < th dose independent rect. 6 5
684 191.02 temperature 10.0 270 > th dose independent rect. 11 19
685 191.03 precipitation 0.1 270 < th dose independent rect. 6 5
686 191.03 precipitation 0.1 270 < th dose dependent rect. 6 5
713 191.41 wind 9.0 270 < th dose independent rect. 11 19
719 191.48 precipitation 0.1 90 < th dose independent rect. 18 10
720 191.48 precipitation 0.1 90 < th dose dependent rect. 18 10
722 191.51 temperature 25.0 30 > th dose dependent rect. 12 19
731 191.56 humidity 90.0 30 < th dose dependent rect. 12 12
841 192.64 temperature 10.0 1440 > th dose independent rect. 13 6
845 192.64 temperature 10.0 1440 > th dose independent rect. 19 18
848 192.64 atmosphere 995.0 1440 > th dose independent rect. 19 18
878 192.96 temperature 10.0 270 > th dose independent rect. 11 6
879 192.96 atmosphere 1015.0 270 < th dose independent rect. 11 6
907 193.22 atmosphere 995.0 270 > th dose independent rect. 17 18
915 193.29 atmosphere 1015.0 30 < th dose dependent rect. 12 7
916 193.31 temperature 15.0 270 > th dose independent rect. 7 3
945 193.60 wind 9.0 270 < th dose independent rect. 7 3
946 193.60 humidity 50.0 270 > th dose independent rect. 7 3
947 193.60 wind 9.0 270 < th dose independent rect. 11 6
949 193.61 wind 9.0 270 < th dose independent rect. 17 18
955 193.65 atmosphere 995.0 270 > th dose independent rect. 7 3
956 193.65 atmosphere 1015.0 270 < th dose independent rect. 7 3
959 193.65 temperature 10.0 270 > th dose independent rect. 10 21
960 193.66 precipitation 0.1 270 < th dose independent rect. 7 3
961 193.66 precipitation 0.1 270 < th dose dependent rect. 7 3
985 193.86 wind 9.0 30 < th dose independent rect. 19 17
989 193.88 temperature 10.0 30 > th dose independent rect. 12 7
991 193.88 atmosphere 1015.0 30 < th dose independent rect. 12 7
993 193.88 atmosphere 995.0 30 > th dose independent rect. 19 17