Os01g0823500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF623, plant domain containing protein.
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Os01g0823500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF623, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 356.21 | 0.887 | 6.57 | -3.26 | 2.72 | 1.94 | 4.42 | -1.38 | -0.197 | 8.41 | 24.94 | 5577 | -- | -- |
| 356.73 | 0.88 | 6.54 | -2.88 | 2.73 | 1.8 | 4.51 | -- | -0.0891 | 8.41 | 25.4 | 5579 | -- | -- |
| 416.26 | 0.95 | 6.56 | -3.1 | 2.7 | 1.86 | -- | -1.47 | -0.163 | 8.23 | 25.51 | 5609 | -- | -- |
| 416.93 | 0.951 | 6.51 | -2.72 | 2.71 | 1.75 | -- | -- | -0.0888 | 8.2 | 25.4 | 5637 | -- | -- |
| 814.68 | 1.33 | 6.62 | -3.13 | -- | 1.88 | -- | -1.6 | -0.118 | -- | 26.12 | 5738 | -- | -- |
| 473.39 | 1.02 | 6.48 | -2.19 | 2.71 | -- | 4.32 | -- | 0.0773 | 8.2 | -- | -- | -- | -- |
| 529.41 | 1.08 | 6.48 | -2.07 | 2.72 | -- | -- | -- | 0.0714 | 8.01 | -- | -- | -- | -- |
| 816.14 | 1.33 | 6.58 | -2.67 | -- | 1.73 | -- | -- | -0.0383 | -- | 26.1 | 5739 | -- | -- |
| 588.67 | 1.13 | 6.41 | -- | 2.69 | 1.05 | -- | -- | 0.369 | 8.22 | 27.8 | 5578 | -- | -- |
| 934.31 | 1.43 | 6.55 | -2.04 | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
| 641.89 | 1.19 | 6.43 | -- | 2.71 | -- | -- | -- | 0.302 | 8.06 | -- | -- | -- | -- |
| 983.82 | 1.46 | 6.48 | -- | -- | 1.08 | -- | -- | 0.41 | -- | 28.3 | 5731 | -- | -- |
| 1044.01 | 1.51 | 6.5 | -- | -- | -- | -- | -- | 0.332 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 343.71 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 6 | 343.95 | temperature | 25 | 14400 | > th | dose dependent | sin | 12 | NA |
| 22 | 344.38 | temperature | 25 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 86 | 345.58 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 98 | 345.66 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 108 | 345.81 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 139 | 346.07 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 166 | 346.26 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 177 | 346.28 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 184 | 346.28 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 17 |
| 189 | 346.28 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 215 | 346.33 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 216 | 346.33 | temperature | 25 | 14400 | > th | dose dependent | rect. | 5 | 22 |
| 224 | 346.34 | temperature | 25 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 285 | 346.44 | temperature | 30 | 14400 | < th | dose independent | sin | 21 | NA |
| 386 | 346.68 | temperature | 30 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 418 | 346.75 | temperature | 30 | 14400 | > th | dose independent | sin | 20 | NA |
| 507 | 346.81 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 526 | 346.82 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 540 | 346.84 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 543 | 346.86 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 548 | 346.87 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 632 | 347.15 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 734 | 347.18 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 990 | 348.01 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |