Os01g0819800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os01g0819800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.07 | 0.461 | 6.74 | 2.82 | 1.81 | 0.703 | 0.328 | -1.89 | 0.469 | 19.1 | 71 | 1389 | -- | -- |
| 98.29 | 0.462 | 6.74 | 2.7 | 1.83 | 0.686 | 0.317 | -- | 0.426 | 19.4 | 82.25 | 966 | -- | -- |
| 96.35 | 0.457 | 6.74 | 2.81 | 1.81 | 0.701 | -- | -1.86 | 0.469 | 19.1 | 71 | 1374 | -- | -- |
| 96.33 | 0.457 | 6.73 | 2.53 | 1.91 | 0.806 | -- | -- | 0.475 | 19.4 | 86.64 | 1022 | -- | -- |
| 268.34 | 0.763 | 6.69 | 2.76 | -- | 0.948 | -- | -1.89 | 0.465 | -- | 73.41 | 1356 | -- | -- |
| 105.47 | 0.481 | 6.76 | 2.64 | 1.83 | -- | 0.293 | -- | 0.36 | 19 | -- | -- | -- | -- |
| 105.7 | 0.481 | 6.76 | 2.63 | 1.83 | -- | -- | -- | 0.36 | 19 | -- | -- | -- | -- |
| 271.92 | 0.768 | 6.69 | 2.54 | -- | 0.89 | -- | -- | 0.426 | -- | 77.36 | 1350 | -- | -- |
| 261.85 | 0.754 | 6.76 | -- | 1.79 | 1.24 | -- | -- | 0.329 | 19.3 | 87.64 | 1125 | -- | -- |
| 282.83 | 0.786 | 6.71 | 2.6 | -- | -- | -- | -- | 0.327 | -- | -- | -- | -- | -- |
| 288.32 | 0.794 | 6.82 | -- | 1.81 | -- | -- | -- | 0.0671 | 19.1 | -- | -- | -- | -- |
| 432.46 | 0.969 | 6.74 | -- | -- | 1.28 | -- | -- | 0.252 | -- | 85.95 | 1352 | -- | -- |
| 460.55 | 1 | 6.78 | -- | -- | -- | -- | -- | 0.0388 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.76 | humidity | 80 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 3 | 91.86 | humidity | 90 | 720 | > th | dose dependent | rect. | 12 | 13 |
| 40 | 93.14 | humidity | 90 | 720 | > th | dose dependent | sin | 18 | NA |
| 45 | 93.24 | humidity | 90 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 46 | 93.25 | humidity | 80 | 1440 | > th | dose independent | rect. | 12 | 5 |
| 59 | 93.48 | humidity | 80 | 1440 | < th | dose independent | rect. | 12 | 5 |
| 78 | 93.69 | humidity | 90 | 720 | > th | dose independent | rect. | 12 | 13 |
| 87 | 93.75 | humidity | 80 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 91 | 93.81 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 3 |
| 92 | 93.81 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 119 | 94.00 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 143 | 94.16 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 149 | 94.21 | humidity | 90 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 155 | 94.28 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 22 |
| 172 | 94.39 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 20 |
| 179 | 94.42 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 10 |
| 181 | 94.43 | humidity | 90 | 720 | > th | dose independent | rect. | 21 | 3 |
| 270 | 94.91 | humidity | 90 | 720 | > th | dose independent | sin | 17 | NA |
| 295 | 95.03 | humidity | 80 | 1440 | > th | dose independent | rect. | 22 | 20 |
| 309 | 95.09 | humidity | 80 | 1440 | > th | dose independent | sin | 23 | NA |
| 323 | 95.12 | humidity | 70 | 1440 | > th | dose dependent | rect. | 22 | 20 |
| 331 | 95.15 | humidity | 80 | 1440 | < th | dose independent | rect. | 21 | 21 |
| 338 | 95.17 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 15 |
| 351 | 95.22 | humidity | 90 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 362 | 95.27 | humidity | 60 | 270 | > th | dose independent | rect. | 6 | 22 |
| 365 | 95.29 | humidity | 90 | 1440 | < th | dose independent | rect. | 10 | 19 |
| 374 | 95.31 | radiation | 20 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 386 | 95.34 | humidity | 80 | 1440 | < th | dose independent | sin | 23 | NA |
| 421 | 95.40 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 15 |
| 547 | 95.59 | humidity | 90 | 720 | > th | dose independent | rect. | 12 | 18 |
| 617 | 95.71 | radiation | 20 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 656 | 95.76 | humidity | 90 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 770 | 95.93 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 785 | 95.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 804 | 95.98 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 870 | 96.07 | humidity | 70 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 884 | 96.09 | temperature | 30 | 270 | < th | dose independent | sin | 18 | NA |
| 917 | 96.13 | temperature | 30 | 270 | > th | dose independent | rect. | 10 | 9 |
| 961 | 96.16 | humidity | 70 | 1440 | > th | dose dependent | no | NA | NA |