Os01g0819100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os01g0819100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 295.82 | 0.808 | 4.92 | -4.54 | 1.34 | -1.58 | -0.7 | 7.3 | -0.679 | 7.69 | 29.95 | 1428 | -- | -- |
| 303.19 | 0.811 | 4.73 | -3 | 1.32 | -0.806 | -0.6 | -- | -0.61 | 7.82 | 29.5 | 2682 | -- | -- |
| 297.19 | 0.803 | 4.92 | -4.55 | 1.34 | -1.57 | -- | 7.22 | -0.679 | 7.66 | 29.97 | 1421 | -- | -- |
| 304.28 | 0.812 | 4.74 | -3 | 1.34 | -0.826 | -- | -- | -0.635 | 7.75 | 29.7 | 2647 | -- | -- |
| 393.38 | 0.924 | 4.94 | -4.46 | -- | -1.59 | -- | 7.03 | -0.657 | -- | 29.96 | 1448 | -- | -- |
| 333.82 | 0.857 | 4.75 | -2.73 | 1.32 | -- | -0.628 | -- | -0.672 | 7.47 | -- | -- | -- | -- |
| 334.89 | 0.857 | 4.75 | -2.74 | 1.32 | -- | -- | -- | -0.672 | 7.42 | -- | -- | -- | -- |
| 398.55 | 0.93 | 4.79 | -2.99 | -- | -0.729 | -- | -- | -0.591 | -- | 32 | 1316 | -- | -- |
| 527.58 | 1.07 | 4.66 | -- | 1.31 | -0.38 | -- | -- | -0.29 | 7.72 | 30.8 | 2505 | -- | -- |
| 428.21 | 0.967 | 4.78 | -2.72 | -- | -- | -- | -- | -0.65 | -- | -- | -- | -- | -- |
| 533.34 | 1.08 | 4.68 | -- | 1.3 | -- | -- | -- | -0.366 | 7.57 | -- | -- | -- | -- |
| 613.96 | 1.15 | 4.68 | -- | -- | -0.363 | -- | -- | -0.262 | -- | 30.61 | 5735 | -- | -- |
| 623.79 | 1.17 | 4.71 | -- | -- | -- | -- | -- | -0.348 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 283.04 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 2 | 283.15 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 10 |
| 3 | 283.16 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 8 | 283.25 | wind | 5 | 43200 | < th | dose independent | rect. | 7 | 10 |
| 12 | 283.30 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 8 |
| 16 | 283.38 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 18 | 283.39 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 55 | 283.68 | wind | 5 | 43200 | > th | dose independent | sin | 0 | NA |
| 64 | 283.74 | atmosphere | 1000 | 43200 | < th | dose dependent | sin | 10 | NA |
| 71 | 283.78 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 17 |
| 77 | 283.81 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 19 |
| 96 | 283.88 | wind | 5 | 43200 | < th | dose independent | sin | 0 | NA |
| 142 | 284.10 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 151 | 284.13 | atmosphere | 1000 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 158 | 284.16 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 17 |
| 166 | 284.19 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 262 | 284.50 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 266 | 284.51 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 270 | 284.51 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 274 | 284.52 | atmosphere | 1000 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 279 | 284.53 | atmosphere | 1000 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 408 | 284.70 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 430 | 284.73 | atmosphere | 1000 | 43200 | < th | dose independent | sin | 9 | NA |
| 434 | 284.74 | atmosphere | 1000 | 43200 | > th | dose independent | sin | 9 | NA |
| 605 | 285.00 | atmosphere | 1000 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 621 | 285.02 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 634 | 285.03 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 735 | 285.14 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 756 | 285.15 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 772 | 285.17 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 18 |
| 784 | 285.18 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 813 | 285.21 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 852 | 285.24 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 974 | 285.34 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 5 | 23 |