Os01g0818800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0818800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.12 | 0.399 | 2.95 | -0.436 | 0.091 | -1.4 | -0.402 | 7.64 | 0.0918 | 4.91 | 1000 | 677 | -- | -- |
| 80.43 | 0.421 | 2.87 | -0.00747 | 0.13 | -0.00573 | -0.344 | -- | 0.0732 | 3.33 | 1000 | 677 | -- | -- |
| 72.32 | 0.396 | 2.94 | -0.403 | 0.0952 | -1.31 | -- | 7.15 | 0.0967 | 3 | 1000 | 688 | -- | -- |
| 80.13 | 0.42 | 2.87 | -0.0173 | 0.134 | -0.125 | -- | -- | 0.0888 | 2.41 | 1002 | 391 | -- | -- |
| 72.87 | 0.398 | 2.94 | -0.409 | -- | -1.32 | -- | 7.21 | 0.0963 | -- | 1000 | 693 | -- | -- |
| 80.43 | 0.42 | 2.87 | -0.00645 | 0.129 | -- | -0.344 | -- | 0.0728 | 3.33 | -- | -- | -- | -- |
| 80.74 | 0.421 | 2.87 | 6.52e-05 | 0.129 | -- | -- | -- | 0.075 | 2.35 | -- | -- | -- | -- |
| 81.14 | 0.421 | 2.87 | -0.0123 | -- | -0.129 | -- | -- | 0.091 | -- | 1002 | 1561 | -- | -- |
| 80.14 | 0.419 | 2.87 | -- | 0.134 | -0.124 | -- | -- | 0.0905 | 2.41 | 1002 | 410 | -- | -- |
| 81.73 | 0.422 | 2.87 | 0.00551 | -- | -- | -- | -- | 0.0782 | -- | -- | -- | -- | -- |
| 80.74 | 0.42 | 2.87 | -- | 0.129 | -- | -- | -- | 0.075 | 2.35 | -- | -- | -- | -- |
| 81.13 | 0.421 | 2.87 | -- | -- | -0.131 | -- | -- | 0.0919 | -- | 1002 | 1533 | -- | -- |
| 81.73 | 0.422 | 2.87 | -- | -- | -- | -- | -- | 0.0776 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.88 | wind | 7.0 | 90 | > th | dose independent | rect. | 20 | 1 |
| 3 | 63.88 | wind | 7.0 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 6 | 63.89 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 21 | 1 |
| 17 | 63.89 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 60 | 64.16 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 21 | 1 |
| 71 | 64.16 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 21 | 1 |
| 242 | 69.29 | wind | 7.0 | 30 | > th | dose dependent | sin | 11 | NA |
| 273 | 69.64 | precipitation | 0.1 | 90 | > th | dose independent | sin | 15 | NA |
| 274 | 69.64 | precipitation | 0.1 | 90 | < th | dose independent | sin | 15 | NA |
| 277 | 69.64 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 15 | NA |
| 360 | 70.15 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 24 | 12 |
| 381 | 70.26 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 24 | 10 |
| 421 | 70.50 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 15 | NA |
| 629 | 71.22 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 3 | 23 |
| 664 | 71.29 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 3 | 16 |
| 723 | 71.50 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 13 | 9 |
| 724 | 71.51 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 729 | 71.54 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 730 | 71.55 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 10 | 15 |
| 731 | 71.56 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 733 | 71.58 | atmosphere | 1000.0 | 720 | > th | dose independent | sin | 19 | NA |
| 735 | 71.59 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 736 | 71.59 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 754 | 71.62 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 763 | 71.66 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 766 | 71.68 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 13 | 16 |
| 769 | 71.70 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 771 | 71.70 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 772 | 71.70 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 775 | 71.70 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 777 | 71.70 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 779 | 71.70 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 784 | 71.70 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 785 | 71.70 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 786 | 71.70 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 788 | 71.70 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 793 | 71.70 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 798 | 71.72 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 16 | 23 |
| 806 | 71.75 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 16 | 2 |
| 819 | 71.78 | wind | 9.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 820 | 71.78 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 826 | 71.78 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 982 | 71.78 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 983 | 71.78 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 988 | 71.78 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |