Os01g0815400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0815400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.64 | 0.525 | 11.3 | -3.23 | 1.59 | 0.836 | 1.16 | -2.91 | -1.06 | 6.72 | 21.71 | 1261 | -- | -- |
| 131.04 | 0.533 | 11.3 | -2.54 | 1.61 | 0.695 | 1.08 | -- | -0.912 | 6.57 | 17.76 | 7476 | -- | -- |
| 127.22 | 0.525 | 11.3 | -3.12 | 1.68 | 0.821 | -- | -3 | -1.03 | 6.7 | 20.68 | 998 | -- | -- |
| 133.63 | 0.538 | 11.3 | -2.48 | 1.63 | 0.652 | -- | -- | -0.913 | 6.37 | 19.53 | 7508 | -- | -- |
| 266.24 | 0.76 | 11.4 | -3.1 | -- | 0.73 | -- | -2.38 | -0.978 | -- | 21.2 | 2740 | -- | -- |
| 143.03 | 0.561 | 11.2 | -2.16 | 1.62 | -- | 1.06 | -- | -0.686 | 6.5 | -- | -- | -- | -- |
| 145.54 | 0.565 | 11.2 | -2.15 | 1.62 | -- | -- | -- | -0.69 | 6.35 | -- | -- | -- | -- |
| 266.43 | 0.76 | 11.3 | -2.46 | -- | 0.643 | -- | -- | -0.876 | -- | 23.17 | 7119 | -- | -- |
| 186.68 | 0.636 | 11.1 | -- | 1.62 | -1.38 | -- | -- | 0.00304 | 6.29 | 16.7 | 47520 | -- | -- |
| 282.29 | 0.785 | 11.2 | -2.1 | -- | -- | -- | -- | -0.655 | -- | -- | -- | -- | -- |
| 267.06 | 0.764 | 11.2 | -- | 1.59 | -- | -- | -- | -0.451 | 6.42 | -- | -- | -- | -- |
| 284.32 | 0.785 | 11.2 | -- | -- | -1.18 | -- | -- | -0.491 | -- | 35.38 | 41097 | -- | -- |
| 399.11 | 0.932 | 11.2 | -- | -- | -- | -- | -- | -0.422 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.62 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 2 | 115.09 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 3 | 115.56 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 6 | 117.02 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 9 | 117.58 | precipitation | 0.1 | 270 | < th | dose independent | sin | 1 | NA |
| 10 | 117.58 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 1 | NA |
| 13 | 117.72 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 15 | 117.74 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 16 | 117.77 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 22 | 117.89 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 23 | 117.91 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 24 | 118.05 | radiation | 10.0 | 90 | < th | dose independent | rect. | 13 | 14 |
| 25 | 118.06 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 27 | 118.07 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 28 | 118.09 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 30 | 118.11 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 31 | 118.12 | wind | 5.0 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 32 | 118.12 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 9 | 12 |
| 34 | 118.16 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 14 |
| 37 | 118.18 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 39 | 118.19 | wind | 3.0 | 43200 | > th | dose dependent | sin | 21 | NA |
| 49 | 118.26 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 55 | 118.27 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 64 | 118.32 | wind | 5.0 | 43200 | > th | dose independent | rect. | 10 | 10 |
| 76 | 118.38 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 11 |
| 84 | 118.42 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 102 | 118.50 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 5 |
| 110 | 118.54 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 118 | 118.57 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 121 | 118.58 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 128 | 118.62 | wind | 5.0 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 131 | 118.63 | wind | 9.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 137 | 118.65 | wind | 5.0 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 140 | 118.66 | humidity | 60.0 | 720 | > th | dose independent | rect. | 14 | 11 |
| 144 | 118.68 | wind | 5.0 | 43200 | < th | dose independent | sin | 20 | NA |
| 148 | 118.68 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 14 |
| 169 | 118.73 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 15 |
| 176 | 118.75 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 179 | 118.75 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 12 |
| 267 | 118.91 | radiation | 10.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 281 | 118.94 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 362 | 119.09 | wind | 5.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 370 | 119.10 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 373 | 119.11 | humidity | 60.0 | 720 | > th | dose independent | rect. | 14 | 5 |
| 448 | 119.22 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 12 | 19 |
| 486 | 119.29 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 498 | 119.32 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 561 | 119.41 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 575 | 119.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 20 |
| 602 | 119.45 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 612 | 119.47 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 630 | 119.49 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 19 |
| 661 | 119.52 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 15 | 7 |
| 671 | 119.54 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 678 | 119.55 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 9 |
| 741 | 119.63 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 770 | 119.68 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 21 |
| 861 | 119.79 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 947 | 119.92 | wind | 1.0 | 43200 | > th | dose dependent | no | NA | NA |
| 951 | 119.93 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 956 | 119.94 | wind | 3.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 963 | 119.95 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 975 | 119.96 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 979 | 119.97 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |