Os01g0814200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 (EC 3.1.3.56) (Cotyledon vascular pattern 2 protein).
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Os01g0814200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 (EC 3.1.3.56) (Cotyledon vascular pattern 2 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.36 | 0.454 | 4.42 | -0.95 | 1.05 | -0.486 | -0.989 | -0.949 | -0.298 | 22.9 | 28.2 | 1570 | -- | -- |
| 94 | 0.452 | 4.46 | -1.18 | 1.03 | -0.623 | -0.978 | -- | -0.377 | 23 | 28.5 | 1675 | -- | -- |
| 97.36 | 0.46 | 4.42 | -0.929 | 1.06 | -0.509 | -- | -0.889 | -0.289 | 22.9 | 27.9 | 1593 | -- | -- |
| 97.82 | 0.461 | 4.46 | -1.18 | 1.04 | -0.6 | -- | -- | -0.363 | 23.1 | 28.4 | 1659 | -- | -- |
| 142.29 | 0.556 | 4.39 | -1.1 | -- | -0.96 | -- | 0.142 | -0.358 | -- | 26.69 | 896 | -- | -- |
| 109.16 | 0.49 | 4.43 | -1.03 | 1.07 | -- | -0.943 | -- | -0.258 | 22.8 | -- | -- | -- | -- |
| 112.88 | 0.498 | 4.43 | -0.99 | 1.08 | -- | -- | -- | -0.255 | 22.9 | -- | -- | -- | -- |
| 137.92 | 0.547 | 4.47 | -1.29 | -- | -1.13 | -- | -- | -0.527 | -- | 26.47 | 890 | -- | -- |
| 132.72 | 0.537 | 4.42 | -- | 1.03 | -0.398 | -- | -- | -0.214 | 22.9 | 28.7 | 1657 | -- | -- |
| 184.63 | 0.635 | 4.4 | -0.968 | -- | -- | -- | -- | -0.248 | -- | -- | -- | -- | -- |
| 138.74 | 0.551 | 4.4 | -- | 1.07 | -- | -- | -- | -0.145 | 22.8 | -- | -- | -- | -- |
| 179.09 | 0.623 | 4.44 | -- | -- | -0.823 | -- | -- | -0.414 | -- | 25.41 | 808 | -- | -- |
| 209.34 | 0.675 | 4.38 | -- | -- | -- | -- | -- | -0.141 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.29 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 2 | 91.32 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 4 | 91.47 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 21 | 92.35 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 8 |
| 23 | 92.37 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 25 | 92.38 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 29 | 92.38 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 14 |
| 41 | 92.55 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 43 | 92.62 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 46 | 92.76 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 53 | 92.83 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 54 | 92.83 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 55 | 92.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 57 | 92.85 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 70 | 92.86 | wind | 9 | 43200 | > th | dose dependent | sin | 11 | NA |
| 72 | 92.87 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 78 | 92.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 81 | 92.91 | radiation | 30 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 98 | 92.96 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 109 | 92.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 115 | 93.00 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 138 | 93.04 | temperature | 20 | 1440 | > th | dose dependent | sin | 23 | NA |
| 153 | 93.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 11 |
| 339 | 93.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 13 |
| 436 | 93.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 18 |
| 471 | 93.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 5 |
| 491 | 93.50 | wind | 9 | 43200 | > th | dose independent | sin | 10 | NA |
| 522 | 93.52 | radiation | 10 | 1440 | < th | dose dependent | sin | 13 | NA |
| 563 | 93.56 | radiation | 10 | 1440 | < th | dose independent | sin | 14 | NA |
| 610 | 93.61 | temperature | 30 | 1440 | < th | dose dependent | sin | 22 | NA |
| 616 | 93.62 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 642 | 93.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 716 | 93.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 917 | 93.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 1 |