Os01g0814000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0814000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.61 | 0.422 | 11.2 | 0.744 | 2.06 | 0.54 | 0.0701 | -0.027 | -0.0108 | 18.1 | 20.03 | 10 | -- | -- |
| 80.61 | 0.418 | 11.2 | 0.744 | 2.06 | 0.54 | 0.0726 | -- | -0.0106 | 18.1 | 20.03 | 10 | -- | -- |
| 80.62 | 0.418 | 11.2 | 0.744 | 2.06 | 0.54 | -- | -0.027 | -0.0108 | 18.1 | 20.03 | 10 | -- | -- |
| 80.62 | 0.418 | 11.2 | 0.743 | 2.06 | 0.538 | -- | -- | -0.0103 | 18.1 | 20.03 | 10 | -- | -- |
| 111.1 | 0.491 | 11 | 0.914 | -- | 2.21 | -- | 1.15 | 0.0311 | -- | 0.8284 | 662 | -- | -- |
| 91.56 | 0.449 | 11.2 | 0.806 | 2.14 | -- | -0.131 | -- | -0.00466 | 17.3 | -- | -- | -- | -- |
| 91.61 | 0.448 | 11.2 | 0.806 | 2.13 | -- | -- | -- | -0.00527 | 17.3 | -- | -- | -- | -- |
| 102.74 | 0.472 | 11.1 | 0.616 | -- | 2.37 | -- | -- | -0.1 | -- | 0.81 | 669 | -- | -- |
| 95.06 | 0.454 | 11.2 | -- | 2.05 | 0.595 | -- | -- | -0.0936 | 18.2 | 20.02 | 10 | -- | -- |
| 329.19 | 0.848 | 11.1 | 0.733 | -- | -- | -- | -- | -0.0583 | -- | -- | -- | -- | -- |
| 108.73 | 0.488 | 11.2 | -- | 2.12 | -- | -- | -- | -0.095 | 17.3 | -- | -- | -- | -- |
| 113.28 | 0.496 | 11.1 | -- | -- | 2.42 | -- | -- | -0.148 | -- | 0.69 | 672 | -- | -- |
| 343.37 | 0.865 | 11.1 | -- | -- | -- | -- | -- | -0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.17 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 2 | 66.71 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 3 | 67.18 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 7 | 67.81 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 10 |
| 8 | 67.82 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 11 | 67.99 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 18 | 68.34 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 24 | 68.61 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 10 |
| 26 | 68.76 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 31 | 68.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 33 | 68.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 35 | 68.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 47 | 69.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 49 | 69.16 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 50 | 69.16 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 52 | 69.16 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 53 | 69.16 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 55 | 69.16 | radiation | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 57 | 69.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 65 | 69.24 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 71 | 69.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 73 | 69.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 74 | 69.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 75 | 69.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 78 | 69.41 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 82 | 69.51 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 83 | 69.51 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 84 | 69.57 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 88 | 69.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 90 | 69.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 91 | 69.63 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 94 | 69.63 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 99 | 69.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 105 | 69.71 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 119 | 69.82 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 142 | 70.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 146 | 70.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 147 | 70.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 149 | 70.20 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 151 | 70.21 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 160 | 70.22 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 162 | 70.23 | temperature | 20.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 187 | 70.33 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 22 | 6 |
| 193 | 70.39 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 206 | 70.45 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 228 | 70.66 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 251 | 70.76 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 18 |
| 253 | 70.76 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 256 | 70.78 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 17 |
| 259 | 70.81 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 265 | 70.83 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 309 | 71.11 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 8 |
| 311 | 71.13 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 317 | 71.17 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 355 | 71.31 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 380 | 71.43 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 387 | 71.48 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 417 | 71.55 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 424 | 71.57 | humidity | 70.0 | 10 | > th | dose independent | rect. | 4 | 6 |
| 451 | 71.67 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 472 | 71.79 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 488 | 71.87 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 513 | 71.98 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 520 | 72.01 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 15 |
| 553 | 72.16 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 5 |
| 556 | 72.16 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 562 | 72.18 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 566 | 72.18 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 568 | 72.18 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 572 | 72.18 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 574 | 72.18 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 576 | 72.18 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 588 | 72.22 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 639 | 72.44 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 15 | 18 |
| 653 | 72.47 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 701 | 72.59 | radiation | 20.0 | 10 | < th | dose independent | rect. | 4 | 19 |
| 749 | 72.68 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 6 |
| 752 | 72.69 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 753 | 72.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 7 |
| 755 | 72.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 758 | 72.71 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 803 | 72.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 8 |
| 805 | 72.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 8 |
| 806 | 72.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 807 | 72.87 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 808 | 72.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 809 | 72.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 810 | 72.87 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 815 | 72.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 817 | 72.87 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 819 | 72.87 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 826 | 72.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 830 | 72.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 831 | 72.89 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 846 | 72.93 | radiation | 10.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 865 | 72.96 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 877 | 73.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 878 | 73.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 882 | 73.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 883 | 73.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 889 | 73.01 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 897 | 73.03 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 898 | 73.03 | radiation | 10.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 905 | 73.05 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 937 | 73.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 17 |
| 939 | 73.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 985 | 73.20 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 18 |