Os01g0813800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 1 protein.
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Os01g0813800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 1 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 391.68 | 0.93 | 6.44 | -4.94 | 3.18 | -1.76 | -0.722 | -0.631 | -1.22 | 1.41 | 70 | 1446 | -- | -- |
| 392.53 | 0.923 | 6.43 | -4.85 | 3.16 | -1.81 | -0.718 | -- | -1.2 | 1.4 | 69.84 | 1450 | -- | -- |
| 393.74 | 0.924 | 6.44 | -4.91 | 3.21 | -1.75 | -- | -0.62 | -1.21 | 1.43 | 69.85 | 1429 | -- | -- |
| 394.59 | 0.925 | 6.42 | -4.83 | 3.16 | -1.83 | -- | -- | -1.19 | 1.41 | 69.84 | 1450 | -- | -- |
| 675.46 | 1.22 | 6.43 | -4.95 | -- | -2.02 | -- | -0.433 | -1.35 | -- | 78.99 | 47 | -- | -- |
| 519.36 | 1.07 | 6.46 | -5.27 | 3.13 | -- | -1.13 | -- | -1.34 | 1.34 | -- | -- | -- | -- |
| 524.53 | 1.07 | 6.46 | -5.23 | 3.14 | -- | -- | -- | -1.34 | 1.36 | -- | -- | -- | -- |
| 672.68 | 1.21 | 6.44 | -5.01 | -- | -2.08 | -- | -- | -1.37 | -- | 79 | 48 | -- | -- |
| 988.42 | 1.46 | 6.29 | -- | 3.38 | -2.54 | -- | -- | -0.606 | 1.39 | 69.32 | 1342 | -- | -- |
| 1130.27 | 1.57 | 6.41 | -5.11 | -- | -- | -- | -- | -1.27 | -- | -- | -- | -- | -- |
| 1245.7 | 1.65 | 6.33 | -- | 3.05 | -- | -- | -- | -0.754 | 1.29 | -- | -- | -- | -- |
| 1319.39 | 1.7 | 6.31 | -- | -- | -2.12 | -- | -- | -0.806 | -- | 79 | 48 | -- | -- |
| 1818.45 | 1.99 | 6.29 | -- | -- | -- | -- | -- | -0.704 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 375.56 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 3 | 376.20 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 32 | 379.00 | humidity | 70.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 54 | 382.16 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 55 | 382.25 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 11 |
| 61 | 382.34 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 20 | 19 |
| 62 | 382.37 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 17 |
| 111 | 384.58 | humidity | 70.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 145 | 386.47 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 159 | 387.93 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 253 | 391.36 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 255 | 391.49 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 260 | 391.71 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 344 | 392.19 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 4 | NA |
| 345 | 392.20 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 21 | 17 |
| 348 | 392.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 357 | 392.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 417 | 393.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 418 | 393.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 6 |
| 424 | 393.60 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 460 | 394.63 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 487 | 395.33 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 497 | 395.48 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 19 |
| 530 | 395.58 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 533 | 395.59 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 559 | 395.72 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 16 |
| 579 | 395.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 8 |
| 598 | 396.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 605 | 396.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 622 | 396.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 624 | 396.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 625 | 396.86 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 644 | 397.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 646 | 397.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 662 | 397.38 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 21 | 19 |
| 682 | 397.70 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 717 | 398.23 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 750 | 398.65 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 766 | 398.87 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 786 | 399.23 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 856 | 400.11 | wind | 1.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 866 | 400.23 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 879 | 400.38 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 898 | 400.63 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 909 | 400.73 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 6 | 9 |
| 984 | 401.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 986 | 401.44 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 999 | 401.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 1000 | 401.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |