Os01g0811400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exostosin-like family protein.
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Os01g0811400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exostosin-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.96 | 0.286 | 8.1 | -0.35 | 0.521 | -0.696 | 0.643 | -0.853 | -0.0264 | 5.1 | 27.7 | 10 | -- | -- |
| 37.85 | 0.289 | 8.11 | -0.484 | 0.537 | -0.804 | 0.488 | -- | -0.0272 | 5.22 | 52.68 | 9 | -- | -- |
| 37.81 | 0.289 | 8.11 | -0.383 | 0.515 | -0.66 | -- | -0.61 | -0.0317 | 5.23 | 27.7 | 10 | -- | -- |
| 38.42 | 0.291 | 8.12 | -0.484 | 0.507 | -0.638 | -- | -- | -0.0558 | 5.27 | 27.7 | 10 | -- | -- |
| 48.86 | 0.326 | 8.1 | -0.328 | -- | -0.482 | -- | -0.633 | 0.0282 | -- | 24.89 | 2 | -- | -- |
| 43.94 | 0.311 | 8.09 | -0.336 | 0.405 | -- | 0.359 | -- | 0.0831 | 6.69 | -- | -- | -- | -- |
| 44.26 | 0.312 | 8.09 | -0.331 | 0.406 | -- | -- | -- | 0.0821 | 6.7 | -- | -- | -- | -- |
| 49.59 | 0.329 | 8.11 | -0.42 | -- | -0.437 | -- | -- | 0.0082 | -- | 24.89 | 2 | -- | -- |
| 43.97 | 0.311 | 8.09 | -- | 0.484 | -0.553 | -- | -- | 0.0539 | 5.61 | 35.61 | 10 | -- | -- |
| 52.89 | 0.34 | 8.1 | -0.321 | -- | -- | -- | -- | 0.0902 | -- | -- | -- | -- | -- |
| 47.15 | 0.321 | 8.08 | -- | 0.402 | -- | -- | -- | 0.119 | 6.75 | -- | -- | -- | -- |
| 53.89 | 0.343 | 8.1 | -- | -- | -0.302 | -- | -- | 0.0747 | -- | 25.1 | 2 | -- | -- |
| 55.61 | 0.348 | 8.09 | -- | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.26 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 2 | 35.35 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 9 | 35.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 21 | 35.85 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 34 | 36.03 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 35 | 36.04 | humidity | 80 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 38 | 36.05 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 42 | 36.09 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 45 | 36.09 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 46 | 36.09 | wind | 9 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 47 | 36.10 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 51 | 36.11 | humidity | 80 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 54 | 36.14 | wind | 1 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 58 | 36.17 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 59 | 36.17 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 60 | 36.18 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 5 |
| 63 | 36.19 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 76 | 36.27 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 80 | 36.28 | wind | 1 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 103 | 36.36 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 104 | 36.36 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 110 | 36.38 | wind | 9 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 121 | 36.40 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 122 | 36.41 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 176 | 36.54 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 202 | 36.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 203 | 36.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 215 | 36.61 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 2 |
| 245 | 36.65 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 285 | 36.72 | wind | 9 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 317 | 36.75 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 339 | 36.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 415 | 36.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 22 |
| 450 | 36.94 | temperature | 10 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 452 | 36.95 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 461 | 36.96 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 508 | 37.02 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 534 | 37.04 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 646 | 37.14 | temperature | 15 | 90 | > th | dose dependent | rect. | 4 | 21 |
| 647 | 37.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 22 |
| 662 | 37.16 | wind | 3 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 726 | 37.21 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 760 | 37.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 761 | 37.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 812 | 37.25 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 838 | 37.26 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 21 |
| 839 | 37.26 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 840 | 37.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 854 | 37.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 856 | 37.28 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 869 | 37.29 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 888 | 37.30 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 958 | 37.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 21 |
| 961 | 37.34 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |