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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0810600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.05 (0.0197) R2 : 0.00529
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0646 (0.0415) R2dN8 : 0.00683 R2N8 : 0.00529
σ : 0.371
deviance : 63.14
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.6 0.363 3.11 -0.156 0.0185 2.92 0.221 -9.12 0.105 10.4 0.3186 781 -- --
62.33 0.368 3.04 0.0938 0.0393 0.389 0.121 -- 0.0819 7.18 -0.3296 191 -- --
59.7 0.36 3.12 -0.159 0.0138 2.98 -- -9.44 0.101 9.96 0.3909 781 -- --
61.57 0.365 3.05 0.0679 0.0289 0.403 -- -- 0.0857 6.9 -0.173 790 -- --
59.72 0.36 3.11 -0.172 -- 3.04 -- -9.67 0.101 -- 0.3877 781 -- --
62.72 0.371 3.05 0.112 0.0327 -- -0.0739 -- 0.076 3.76 -- -- -- --
62.73 0.371 3.05 0.113 0.0351 -- -- -- 0.0763 4.97 -- -- -- --
60.8 0.363 3.04 0.0597 -- 0.429 -- -- 0.0888 -- 1.085 798 -- --
60.81 0.363 3.04 -- 0.0386 0.438 -- -- 0.0831 7.92 1.034 780 -- --
62.8 0.37 3.05 0.114 -- -- -- -- 0.0772 -- -- -- -- --
63.07 0.371 3.05 -- 0.0371 -- -- -- 0.0638 4.87 -- -- -- --
60.89 0.363 3.05 -- -- 0.43 -- -- 0.0832 -- 1.025 781 -- --
63.14 0.371 3.05 -- -- -- -- -- 0.0646 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 56.51 temperature 20.0 30 < th dose dependent rect. 6 6
47 57.09 temperature 20.0 10 < th dose independent rect. 6 7
51 57.15 radiation 1.0 14400 < th dose dependent rect. 23 1
78 57.46 temperature 10.0 30 > th dose dependent rect. 23 23
85 57.51 temperature 20.0 30 < th dose dependent rect. 6 2
102 57.65 wind 7.0 1440 < th dose independent rect. 23 1
108 57.69 humidity 90.0 30 < th dose independent rect. 22 1
109 57.69 temperature 20.0 30 < th dose independent rect. 6 2
119 57.74 temperature 25.0 30 > th dose independent rect. 22 1
120 57.74 temperature 10.0 1440 > th dose independent rect. 23 1
123 57.74 temperature 30.0 1440 < th dose independent rect. 23 1
127 57.74 humidity 50.0 1440 > th dose independent rect. 23 1
138 57.74 atmosphere 995.0 1440 > th dose independent rect. 23 1
139 57.74 radiation 1.0 1440 < th dose independent rect. 23 1
159 57.74 temperature 20.0 10 < th dose independent rect. 8 2
165 57.74 temperature 10.0 1440 > th dose independent rect. 24 23
168 57.74 radiation 1.0 1440 < th dose dependent rect. 23 1
173 57.74 temperature 20.0 10 < th dose dependent rect. 8 2
179 57.75 wind 5.0 10 > th dose independent rect. 8 1
181 57.75 wind 3.0 30 < th dose independent rect. 22 1
182 57.75 atmosphere 1000.0 30 > th dose independent rect. 22 1
184 57.75 wind 5.0 10 > th dose dependent rect. 8 1
188 57.76 wind 1.0 30 > th dose independent rect. 22 1
191 57.76 precipitation 0.1 30 < th dose independent rect. 22 1
195 57.76 atmosphere 1000.0 30 > th dose dependent rect. 22 1
196 57.76 precipitation 0.1 30 < th dose dependent rect. 22 1
204 57.78 humidity 80.0 30 > th dose independent rect. 22 1
206 57.78 temperature 10.0 30 > th dose dependent rect. 22 1
210 57.79 temperature 10.0 30 > th dose independent rect. 22 1
212 57.79 temperature 30.0 30 < th dose independent rect. 22 1
213 57.79 humidity 50.0 30 > th dose independent rect. 22 1
217 57.79 atmosphere 1010.0 30 < th dose independent rect. 22 1
219 57.79 radiation 1.0 30 < th dose independent rect. 22 1
225 57.79 temperature 10.0 30 > th dose independent rect. 23 23
226 57.79 wind 7.0 30 < th dose dependent rect. 22 1
231 57.79 radiation 1.0 30 < th dose dependent rect. 22 1
240 57.80 humidity 50.0 30 > th dose dependent rect. 22 1
252 57.83 humidity 90.0 30 < th dose dependent rect. 22 1
254 57.84 wind 1.0 30 > th dose dependent rect. 22 1
256 57.87 temperature 30.0 30 < th dose dependent rect. 22 1
257 57.89 atmosphere 1015.0 30 < th dose dependent rect. 22 1
271 58.04 wind 9.0 10 < th dose independent rect. 23 23
332 58.43 wind 3.0 90 > th dose dependent rect. 4 3
347 58.79 precipitation 0.1 30 < th dose independent rect. 23 23
352 58.79 precipitation 0.1 30 < th dose dependent rect. 23 23
357 58.93 humidity 80.0 90 < th dose dependent rect. 6 1
362 58.97 wind 9.0 43200 > th dose dependent rect. 20 1
373 59.14 atmosphere 995.0 43200 > th dose independent rect. 15 2
376 59.16 atmosphere 995.0 43200 < th dose independent rect. 15 2
377 59.16 radiation 1.0 43200 < th dose dependent rect. 24 4
378 59.18 wind 9.0 14400 > th dose independent rect. 20 1
379 59.18 wind 9.0 14400 < th dose independent rect. 20 1
391 59.23 humidity 80.0 90 < th dose independent rect. 6 1
392 59.23 atmosphere 995.0 14400 > th dose independent rect. 12 1
395 59.23 atmosphere 995.0 43200 < th dose dependent rect. 15 3
401 59.24 atmosphere 995.0 43200 > th dose independent rect. 15 5
410 59.26 wind 9.0 14400 > th dose independent rect. 18 3
411 59.26 wind 9.0 14400 > th dose dependent rect. 18 17
415 59.27 temperature 15.0 720 > th dose dependent rect. 7 2
419 59.28 wind 3.0 90 > th dose independent rect. 6 1
423 59.28 radiation 1.0 43200 < th dose dependent rect. 1 1
426 59.29 wind 9.0 14400 > th dose dependent rect. 20 15
443 59.36 radiation 1.0 14400 < th dose dependent rect. 20 5
451 59.39 atmosphere 995.0 30 > th dose independent rect. 23 23
456 59.39 wind 9.0 14400 > th dose dependent rect. 18 10
468 59.41 wind 9.0 14400 > th dose dependent rect. 20 8
476 59.42 humidity 90.0 4320 > th dose dependent rect. 21 1
483 59.43 temperature 10.0 720 > th dose dependent rect. 23 12
515 59.48 temperature 20.0 270 < th dose dependent sin 23 NA
534 59.51 temperature 20.0 720 < th dose independent rect. 20 1
539 59.51 temperature 15.0 720 > th dose dependent rect. 7 4
547 59.52 wind 9.0 14400 > th dose independent rect. 18 10
551 59.52 temperature 20.0 270 < th dose dependent rect. 3 19
578 59.56 temperature 20.0 720 < th dose dependent rect. 21 1
579 59.56 precipitation 0.1 43200 > th dose dependent rect. 17 1
581 59.57 precipitation 0.1 14400 < th dose independent rect. 17 1
585 59.57 atmosphere 1000.0 14400 < th dose dependent rect. 12 1
587 59.57 precipitation 0.1 14400 < th dose dependent rect. 17 1
593 59.58 wind 9.0 14400 < th dose independent rect. 18 12
599 59.58 temperature 20.0 270 < th dose dependent rect. 1 21
608 59.59 atmosphere 1000.0 14400 < th dose dependent rect. 12 3
611 59.60 precipitation 0.1 43200 > th dose independent rect. 17 1
616 59.60 wind 9.0 14400 > th dose independent rect. 18 17
626 59.61 wind 9.0 14400 < th dose independent rect. 18 7
636 59.61 temperature 15.0 10 > th dose dependent rect. 2 18
677 59.65 wind 9.0 14400 > th dose independent rect. 20 14
680 59.65 radiation 1.0 43200 < th dose dependent rect. 19 9
692 59.67 atmosphere 1000.0 14400 < th dose independent rect. 12 1
706 59.68 wind 9.0 14400 < th dose independent rect. 18 17
721 59.70 temperature 25.0 90 > th dose independent rect. 20 3
728 59.70 precipitation 0.1 14400 > th dose dependent rect. 20 1
732 59.70 temperature 10.0 720 > th dose dependent rect. 2 9
750 59.72 atmosphere 1000.0 14400 < th dose independent rect. 4 1
763 59.72 precipitation 0.1 720 > th dose dependent rect. 4 14
773 59.73 radiation 1.0 43200 < th dose dependent rect. 22 6
807 59.74 temperature 10.0 720 > th dose dependent rect. 17 18
813 59.75 precipitation 0.1 4320 < th dose independent rect. 14 4
825 59.75 precipitation 0.1 4320 < th dose dependent rect. 14 4
833 59.76 humidity 90.0 14400 < th dose independent rect. 21 1
834 59.76 atmosphere 1000.0 14400 > th dose independent rect. 4 1
849 59.76 atmosphere 1000.0 14400 < th dose independent rect. 4 9
856 59.76 atmosphere 1000.0 14400 > th dose independent rect. 4 11
861 59.76 wind 9.0 14400 < th dose independent rect. 20 15
870 59.76 temperature 15.0 270 > th dose dependent rect. 7 11
885 59.77 atmosphere 1000.0 14400 > th dose independent rect. 4 9
930 59.78 temperature 15.0 10 > th dose dependent rect. 8 12
975 59.80 humidity 90.0 14400 > th dose independent rect. 21 1