Os01g0810500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0810500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 224.88 | 0.705 | 3.05 | 1.29 | 0.128 | 1.26 | -0.265 | 1.25 | 0.249 | 4.9 | 19.81 | 5458 | -- | -- |
| 226.57 | 0.701 | 3 | 1.44 | 0.114 | 1.03 | -0.266 | -- | 0.292 | 4.97 | 19.9 | 5180 | -- | -- |
| 225.05 | 0.699 | 3.05 | 1.29 | 0.129 | 1.26 | -- | 1.26 | 0.249 | 5.39 | 19.82 | 5463 | -- | -- |
| 226.73 | 0.701 | 3 | 1.44 | 0.114 | 1.02 | -- | -- | 0.29 | 5.35 | 19.89 | 5168 | -- | -- |
| 225.61 | 0.7 | 3.06 | 1.34 | -- | 1.34 | -- | 1.45 | 0.259 | -- | 19.66 | 6249 | -- | -- |
| 242.53 | 0.73 | 3.06 | 0.798 | 0.11 | -- | -0.17 | -- | 0.0112 | 5.68 | -- | -- | -- | -- |
| 242.57 | 0.729 | 3.06 | 0.798 | 0.112 | -- | -- | -- | 0.0121 | 6.45 | -- | -- | -- | -- |
| 227.41 | 0.702 | 3 | 1.43 | -- | 1.01 | -- | -- | 0.284 | -- | 19.8 | 5080 | -- | -- |
| 253.22 | 0.741 | 3.1 | -- | 0.142 | 0.409 | -- | -- | -0.161 | 5.05 | 32.4 | 2700 | -- | -- |
| 243.22 | 0.729 | 3.06 | 0.801 | -- | -- | -- | -- | 0.0145 | -- | -- | -- | -- | -- |
| 259.36 | 0.753 | 3.08 | -- | 0.123 | -- | -- | -- | -0.0768 | 6.09 | -- | -- | -- | -- |
| 253.47 | 0.742 | 3.09 | -- | -- | 0.388 | -- | -- | -0.101 | -- | 30.8 | 6247 | -- | -- |
| 260.14 | 0.753 | 3.08 | -- | -- | -- | -- | -- | -0.0744 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 2 | 218.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 3 | 218.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 7 | 219.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 3 |
| 34 | 222.76 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 39 | 222.90 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 43 | 223.10 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 49 | 223.20 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 22 | 4 |
| 55 | 223.24 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 69 | 223.31 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 110 | 223.44 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 170 | 223.61 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 199 | 223.70 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 15 | 8 |
| 250 | 223.88 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 15 | 5 |
| 279 | 223.96 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 282 | 223.97 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 287 | 223.98 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 15 | 3 |
| 307 | 224.05 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 328 | 224.09 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 15 | 7 |
| 333 | 224.10 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 15 | 3 |
| 339 | 224.11 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 358 | 224.13 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 363 | 224.13 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 390 | 224.20 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 399 | 224.22 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 407 | 224.23 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 415 | 224.25 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 12 | NA |
| 440 | 224.30 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 466 | 224.37 | temperature | 15.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 490 | 224.42 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 502 | 224.44 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 554 | 224.53 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 558 | 224.54 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 561 | 224.54 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 626 | 224.67 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 628 | 224.67 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 677 | 224.73 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 697 | 224.77 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 711 | 224.79 | temperature | 20.0 | 4320 | < th | dose independent | sin | 14 | NA |
| 714 | 224.79 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 852 | 224.99 | temperature | 20.0 | 4320 | > th | dose independent | sin | 14 | NA |