Os01g0810000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Utp11 family protein.
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Os01g0810000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Utp11 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.05 | 0.423 | 7.96 | 0.252 | 1.35 | 0.479 | 0.667 | -1.04 | 0.0183 | 16.7 | 19.63 | 1275 | -- | -- |
| 83.61 | 0.426 | 7.97 | 0.241 | 1.34 | 0.459 | 0.578 | -- | 0.0132 | 16.7 | 19.66 | 1274 | -- | -- |
| 82.19 | 0.422 | 7.96 | 0.253 | 1.35 | 0.479 | -- | -1.01 | 0.0174 | 16.6 | 19.62 | 1274 | -- | -- |
| 83.74 | 0.426 | 7.97 | 0.196 | 1.34 | 0.511 | -- | -- | 0.0159 | 16.7 | 29.87 | 1273 | -- | -- |
| 172.69 | 0.615 | 7.97 | 0.0555 | -- | -0.481 | -- | -0.251 | -0.132 | -- | 19.62 | 1274 | -- | -- |
| 90.25 | 0.445 | 7.99 | 0.124 | 1.37 | -- | 0.549 | -- | -0.109 | 16.4 | -- | -- | -- | -- |
| 91.05 | 0.447 | 7.98 | 0.129 | 1.37 | -- | -- | -- | -0.106 | 16.3 | -- | -- | -- | -- |
| 172.46 | 0.614 | 7.97 | 0.0684 | -- | -0.489 | -- | -- | -0.127 | -- | 19.25 | 1311 | -- | -- |
| 84.52 | 0.428 | 7.97 | -- | 1.34 | 0.501 | -- | -- | -0.00446 | 16.6 | 29.91 | 1268 | -- | -- |
| 191.8 | 0.647 | 7.98 | 0.075 | -- | -- | -- | -- | -0.142 | -- | -- | -- | -- | -- |
| 91.49 | 0.447 | 7.99 | -- | 1.37 | -- | -- | -- | -0.12 | 16.3 | -- | -- | -- | -- |
| 172.59 | 0.614 | 7.97 | -- | -- | -0.489 | -- | -- | -0.135 | -- | 19.25 | 1311 | -- | -- |
| 191.95 | 0.647 | 7.98 | -- | -- | -- | -- | -- | -0.151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.59 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 2 | 73.63 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 3 | 73.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 4 | 73.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 5 | 73.85 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 6 | 73.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 4 |
| 7 | 73.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 8 | 74.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 11 | 74.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 12 | 74.23 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 14 | 74.43 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 15 | 74.43 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 18 | 74.46 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 21 | 74.46 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 24 | 74.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 26 | 74.46 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 29 | 74.46 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 31 | 74.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 34 | 74.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 37 | 74.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 38 | 74.47 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 40 | 74.47 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 43 | 74.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 44 | 74.48 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 49 | 74.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 51 | 74.55 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 53 | 74.57 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 62 | 74.85 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 69 | 74.93 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 74 | 75.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 20 |
| 75 | 75.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 85 | 75.14 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 91 | 75.29 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 94 | 75.33 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 183 | 75.69 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 19 |
| 185 | 75.69 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 212 | 75.78 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 227 | 75.88 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 248 | 75.93 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 251 | 75.95 | radiation | 20.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 253 | 75.96 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 8 |
| 264 | 76.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 274 | 76.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 283 | 76.16 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 294 | 76.23 | wind | 5.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 295 | 76.23 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 296 | 76.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 298 | 76.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 305 | 76.30 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 20 |
| 309 | 76.32 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 4 |
| 310 | 76.32 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 313 | 76.32 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 334 | 76.40 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 336 | 76.40 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 337 | 76.40 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 339 | 76.40 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 340 | 76.40 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 341 | 76.40 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 342 | 76.40 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 20 |
| 358 | 76.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 359 | 76.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 9 |
| 362 | 76.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 364 | 76.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 368 | 76.56 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 369 | 76.56 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 380 | 76.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 383 | 76.60 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 384 | 76.60 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 386 | 76.60 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 391 | 76.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 15 |
| 393 | 76.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 415 | 76.70 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 417 | 76.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 418 | 76.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 419 | 76.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 460 | 76.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 461 | 76.87 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 465 | 76.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 466 | 76.87 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 482 | 76.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 484 | 76.94 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 501 | 77.01 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 504 | 77.02 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 508 | 77.04 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 513 | 77.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 9 |
| 517 | 77.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 528 | 77.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 533 | 77.10 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 20 |
| 534 | 77.10 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 20 |
| 549 | 77.17 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 554 | 77.19 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 559 | 77.20 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 646 | 77.34 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 648 | 77.36 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 652 | 77.38 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 673 | 77.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 685 | 77.47 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 699 | 77.49 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 24 | 4 |
| 705 | 77.50 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 713 | 77.53 | radiation | 1.0 | 270 | > th | dose independent | sin | 3 | NA |
| 744 | 77.64 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 767 | 77.72 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 776 | 77.74 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 779 | 77.75 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 783 | 77.76 | radiation | 1.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 864 | 77.95 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 867 | 77.95 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 871 | 77.96 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 20 |
| 892 | 77.99 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 929 | 78.04 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 962 | 78.09 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 965 | 78.09 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 990 | 78.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 9 |