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Os01g0809000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.34 (0.0419) R2 : 0.603
β1 : -1.21 (0.155) R2dD : 0.061 R2D : 0.0891
β2 : 1.67 (0.108) R2dC : 0.223 R2C : 0.296
β3 : -2.73 (0.188) R2dE : 0.223 R2E : 0.309
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.154 (0.0931) R2dN8 : 0.00298 R2N8 : -0.00679
σ : 0.773
deviance : 275.75
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C
peak time of C : 7.52
E
wheather : temperature
threshold : 14.16
memory length : 9
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.93
open length of G : 23.1

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
271.02 0.773 7.33 -1.07 1.67 -2.68 -1.33 1.03 0.194 7.55 15.08 10 5.99 23
271.08 0.767 7.33 -1.14 1.71 -2.82 -1.36 -- 0.164 7.57 14.78 9 5.95 23.1
274.91 0.772 7.32 -1.07 1.72 -2.74 -- 1.32 0.189 7.58 13.9 9 5.97 23.1
275.75 0.773 7.34 -1.21 1.67 -2.73 -- -- 0.154 7.52 14.16 9 5.93 23.1
397.54 0.929 7.34 -0.593 -- -2.94 -- 0.914 0.365 -- 11.6 30 6.68 20.7
361.94 0.892 7.44 -1.72 2.23 -- -0.861 -- -0.315 6.05 -- -- -- --
363.76 0.893 7.44 -1.73 2.23 -- -- -- -0.312 6.04 -- -- -- --
319.29 0.832 7.39 -1.32 -- -2.95 -- -- -0.0532 -- 10.82 429 6.35 16.4
316.99 0.829 7.32 -- 1.64 -2.87 -- -- 0.152 7.75 14.18 9 5.93 23.1
620.47 1.16 7.48 -1.67 -- -- -- -- -0.262 -- -- -- -- --
442.8 0.984 7.4 -- 2.2 -- -- -- -0.119 6.08 -- -- -- --
357.81 0.881 7.39 -- -- -3.43 -- -- 0.138 -- 10.17 337 5.45 20.5
693.81 1.23 7.44 -- -- -- -- -- -0.0769 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 273.01 temperature 15.0 10 > th dose dependent rect. 6 23
4 279.34 temperature 30.0 10 < th dose dependent rect. 3 23
11 286.15 temperature 20.0 10 > th dose independent rect. 6 23
16 289.27 temperature 15.0 30 > th dose dependent rect. 17 23
18 289.68 temperature 30.0 90 < th dose dependent rect. 11 22
22 291.25 temperature 25.0 90 < th dose dependent rect. 23 22
23 291.30 temperature 30.0 10 < th dose dependent rect. 11 23
24 291.49 temperature 30.0 90 < th dose dependent rect. 11 20
26 291.75 temperature 30.0 10 < th dose dependent rect. 13 23
28 291.88 temperature 20.0 90 > th dose independent rect. 6 22
29 291.94 temperature 25.0 90 < th dose dependent rect. 7 23
31 292.14 temperature 25.0 90 < th dose dependent rect. 9 22
34 292.40 temperature 25.0 90 < th dose dependent rect. 21 23
35 292.47 temperature 30.0 10 < th dose dependent no NA NA
39 292.56 temperature 30.0 10 < th dose dependent rect. 15 23
40 292.61 temperature 25.0 90 < th dose dependent rect. 17 23
43 292.74 temperature 25.0 30 < th dose dependent rect. 1 23
46 292.91 temperature 25.0 90 < th dose dependent no NA NA
48 292.96 temperature 30.0 10 < th dose dependent rect. 23 23
57 293.12 temperature 25.0 30 < th dose dependent rect. 19 23
138 295.45 temperature 15.0 90 > th dose dependent sin 8 NA
142 295.65 temperature 30.0 90 < th dose dependent sin 8 NA
167 296.44 atmosphere 1005.0 270 > th dose dependent rect. 11 10
177 296.68 temperature 15.0 10 > th dose dependent no NA NA
205 297.16 temperature 30.0 90 < th dose dependent rect. 15 15
207 297.17 temperature 25.0 30 < th dose dependent rect. 5 23
251 298.04 temperature 30.0 90 < th dose dependent rect. 13 17
312 299.24 temperature 30.0 10 < th dose dependent rect. 14 16
315 299.26 atmosphere 1015.0 10 < th dose dependent rect. 6 23
364 300.34 temperature 20.0 10 > th dose independent rect. 17 23
368 300.37 temperature 25.0 270 < th dose independent sin 10 NA
399 301.19 temperature 15.0 10 > th dose dependent rect. 21 23
446 302.15 temperature 15.0 10 > th dose dependent rect. 1 23
460 302.47 atmosphere 1015.0 90 < th dose dependent rect. 6 21
514 303.28 temperature 25.0 270 < th dose independent rect. 9 21
523 303.43 atmosphere 995.0 10 > th dose dependent rect. 3 23
628 304.77 temperature 25.0 270 > th dose independent sin 10 NA
703 306.20 atmosphere 1005.0 30 > th dose independent rect. 3 23
710 306.29 temperature 15.0 30 > th dose dependent rect. 19 23
717 306.36 temperature 25.0 90 < th dose independent rect. 3 22
756 306.86 temperature 15.0 10 > th dose dependent rect. 9 23
785 307.21 precipitation 0.1 14400 > th dose independent rect. 17 1
788 307.26 temperature 20.0 10 < th dose independent rect. 11 22
799 307.36 atmosphere 1005.0 10 > th dose dependent sin 18 NA
819 307.58 temperature 20.0 10 < th dose independent rect. 18 23
831 307.67 temperature 20.0 10 < th dose independent rect. 1 23
860 307.98 temperature 25.0 270 < th dose independent rect. 17 21
887 308.33 atmosphere 1015.0 10 < th dose dependent rect. 17 23
904 308.44 temperature 20.0 10 < th dose independent rect. 23 23
913 308.51 precipitation 0.1 4320 > th dose dependent rect. 16 2
930 308.59 temperature 20.0 10 < th dose independent rect. 15 23
932 308.60 temperature 20.0 10 < th dose independent no NA NA
945 308.68 temperature 20.0 10 < th dose independent rect. 13 23
954 308.74 temperature 20.0 270 > th dose dependent rect. 17 18
955 308.75 temperature 20.0 10 < th dose independent rect. 7 23
972 308.83 atmosphere 995.0 14400 < th dose independent rect. 18 1
975 308.83 atmosphere 995.0 14400 < th dose dependent rect. 18 1