Os01g0805700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0805700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.89 | 0.162 | 11.1 | -0.00187 | 0.61 | 0.425 | -0.439 | 0.118 | 0.359 | 5.5 | 47.63 | 96 | -- | -- |
| 11.91 | 0.161 | 11 | -0.00204 | 0.599 | 0.427 | -0.43 | -- | 0.36 | 5.52 | 46.44 | 100 | -- | -- |
| 12.33 | 0.164 | 11.1 | -0.00352 | 0.606 | 0.415 | -- | 0.0449 | 0.361 | 5.46 | 47.53 | 100 | -- | -- |
| 12.33 | 0.164 | 11 | -0.00522 | 0.606 | 0.414 | -- | -- | 0.362 | 5.46 | 46.91 | 100 | -- | -- |
| 14.42 | 0.177 | 11.1 | 0.00643 | -- | 0.777 | -- | -0.293 | 0.378 | -- | 6.85 | 521 | -- | -- |
| 14.57 | 0.179 | 11.1 | -0.0192 | 0.752 | -- | -0.286 | -- | 0.332 | 4.16 | -- | -- | -- | -- |
| 14.8 | 0.18 | 11.1 | -0.0162 | 0.749 | -- | -- | -- | 0.334 | 4.12 | -- | -- | -- | -- |
| 14.63 | 0.178 | 11.1 | 0.0017 | -- | 0.773 | -- | -- | 0.376 | -- | 6.79 | 521 | -- | -- |
| 12.33 | 0.164 | 11 | -- | 0.606 | 0.414 | -- | -- | 0.362 | 5.46 | 46.91 | 100 | -- | -- |
| 45.28 | 0.314 | 11.1 | 0.0141 | -- | -- | -- | -- | 0.354 | -- | -- | -- | -- | -- |
| 14.8 | 0.18 | 11.1 | -- | 0.749 | -- | -- | -- | 0.336 | 4.12 | -- | -- | -- | -- |
| 14.63 | 0.178 | 11.1 | -- | -- | 0.772 | -- | -- | 0.376 | -- | 6.837 | 519 | -- | -- |
| 45.29 | 0.314 | 11.1 | -- | -- | -- | -- | -- | 0.352 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.89 | radiation | 40 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 2 | 11.90 | radiation | 1 | 90 | > th | dose dependent | rect. | 7 | 11 |
| 16 | 11.92 | radiation | 40 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 17 | 11.94 | radiation | 20 | 10 | < th | dose dependent | rect. | 6 | 17 |
| 18 | 11.95 | radiation | 40 | 90 | < th | dose dependent | no | NA | NA |
| 20 | 11.98 | radiation | 40 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 22 | 12.00 | radiation | 1 | 90 | > th | dose dependent | no | NA | NA |
| 100 | 12.01 | radiation | 1 | 270 | > th | dose dependent | sin | 4 | NA |
| 102 | 12.01 | radiation | 30 | 90 | < th | dose dependent | sin | 0 | NA |
| 105 | 12.01 | radiation | 40 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 119 | 12.03 | radiation | 20 | 90 | < th | dose independent | rect. | 24 | 23 |
| 123 | 12.04 | radiation | 40 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 124 | 12.05 | radiation | 1 | 90 | > th | dose dependent | sin | 0 | NA |
| 127 | 12.07 | radiation | 20 | 90 | < th | dose independent | rect. | 3 | 19 |
| 131 | 12.07 | radiation | 30 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 154 | 12.10 | radiation | 20 | 270 | < th | dose dependent | sin | 3 | NA |
| 156 | 12.10 | radiation | 30 | 90 | < th | dose dependent | rect. | 5 | 17 |
| 158 | 12.10 | radiation | 1 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 161 | 12.11 | radiation | 40 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 195 | 12.13 | radiation | 10 | 270 | > th | dose independent | rect. | 17 | 22 |
| 200 | 12.13 | radiation | 40 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 207 | 12.13 | radiation | 40 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 208 | 12.14 | radiation | 10 | 270 | > th | dose independent | rect. | 6 | 9 |
| 227 | 12.15 | radiation | 10 | 10 | < th | dose independent | rect. | 6 | 17 |
| 232 | 12.16 | radiation | 10 | 270 | > th | dose independent | sin | 3 | NA |
| 233 | 12.16 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 2 | 17 |
| 264 | 12.19 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 24 | 21 |
| 400 | 12.21 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 1 | 19 |
| 403 | 12.21 | radiation | 40 | 270 | < th | dose independent | rect. | 9 | 22 |
| 420 | 12.22 | radiation | 20 | 90 | < th | dose independent | rect. | 13 | 23 |
| 442 | 12.24 | radiation | 20 | 90 | > th | dose independent | sin | 0 | NA |
| 443 | 12.24 | radiation | 20 | 270 | < th | dose independent | rect. | 1 | 13 |
| 445 | 12.24 | radiation | 20 | 90 | < th | dose independent | rect. | 9 | 23 |
| 451 | 12.24 | radiation | 40 | 10 | < th | dose dependent | rect. | 11 | 12 |
| 473 | 12.25 | radiation | 20 | 90 | > th | dose independent | no | NA | NA |
| 489 | 12.25 | radiation | 20 | 90 | < th | dose independent | rect. | 9 | 13 |
| 531 | 12.25 | radiation | 20 | 270 | < th | dose independent | rect. | 1 | 18 |
| 605 | 12.26 | radiation | 40 | 270 | < th | dose independent | rect. | 11 | 10 |
| 606 | 12.26 | radiation | 20 | 270 | < th | dose independent | rect. | 1 | 11 |
| 609 | 12.26 | radiation | 20 | 90 | > th | dose independent | rect. | 9 | 23 |
| 610 | 12.26 | radiation | 20 | 90 | < th | dose independent | rect. | 15 | 23 |
| 668 | 12.28 | radiation | 40 | 90 | < th | dose dependent | rect. | 9 | 13 |
| 688 | 12.29 | humidity | 70 | 90 | > th | dose independent | rect. | 3 | 19 |
| 705 | 12.29 | radiation | 20 | 10 | < th | dose dependent | rect. | 9 | 14 |
| 749 | 12.31 | radiation | 20 | 90 | < th | dose independent | no | NA | NA |
| 769 | 12.31 | radiation | 40 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 810 | 12.34 | radiation | 20 | 90 | < th | dose independent | sin | 1 | NA |
| 826 | 12.35 | humidity | 70 | 270 | > th | dose independent | rect. | 1 | 18 |
| 868 | 12.37 | radiation | 20 | 90 | < th | dose independent | rect. | 3 | 11 |
| 877 | 12.37 | radiation | 40 | 270 | < th | dose independent | rect. | 2 | 17 |
| 886 | 12.37 | humidity | 70 | 90 | > th | dose independent | rect. | 1 | 21 |
| 968 | 12.39 | radiation | 20 | 90 | < th | dose independent | rect. | 17 | 23 |