Os01g0805500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os01g0805500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112 | 0.497 | 9.86 | -1.57 | 2.68 | 0.829 | 1.01 | 3.23 | -0.613 | 9.11 | 26.7 | 1332 | -- | -- |
| 117.66 | 0.505 | 9.92 | -2.11 | 2.78 | 1.35 | 1.22 | -- | -0.608 | 8.74 | 28.05 | 1896 | -- | -- |
| 115.45 | 0.5 | 9.87 | -1.57 | 2.67 | 0.824 | -- | 3.05 | -0.62 | 9.07 | 26.71 | 1365 | -- | -- |
| 118.76 | 0.508 | 9.95 | -2.3 | 2.79 | 1.38 | -- | -- | -0.755 | 8.81 | 27.24 | 1834 | -- | -- |
| 520.44 | 1.06 | 9.92 | -1.37 | -- | 0.646 | -- | 3.74 | -0.575 | -- | 26.7 | 1469 | -- | -- |
| 175.04 | 0.62 | 9.96 | -1.98 | 2.64 | -- | 0.86 | -- | -0.749 | 8.87 | -- | -- | -- | -- |
| 177.54 | 0.624 | 9.96 | -1.95 | 2.64 | -- | -- | -- | -0.749 | 8.85 | -- | -- | -- | -- |
| 518.32 | 1.06 | 9.95 | -2.31 | -- | 1.1 | -- | -- | -0.567 | -- | 29.7 | 5806 | -- | -- |
| 249.57 | 0.736 | 9.87 | -- | 2.7 | 0.97 | -- | -- | -0.363 | 8.95 | 30.3 | 1825 | -- | -- |
| 575.49 | 1.12 | 10 | -1.95 | -- | -- | -- | -- | -0.73 | -- | -- | -- | -- | -- |
| 278.16 | 0.78 | 9.91 | -- | 2.64 | -- | -- | -- | -0.531 | 8.9 | -- | -- | -- | -- |
| 647.66 | 1.19 | 9.96 | -- | -- | 0.758 | -- | -- | -0.392 | -- | 29.82 | 5810 | -- | -- |
| 676.08 | 1.21 | 9.98 | -- | -- | -- | -- | -- | -0.513 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.46 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 111.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 6 | 112.11 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 9 | 112.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 12 |
| 10 | 112.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 17 |
| 12 | 112.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 9 |
| 25 | 112.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 34 | 112.39 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 39 | 112.42 | temperature | 30 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 46 | 112.53 | temperature | 30 | 1440 | < th | dose independent | sin | 7 | NA |
| 126 | 112.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 146 | 112.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 1 | 18 |
| 169 | 112.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 172 | 112.97 | temperature | 25 | 1440 | > th | dose dependent | sin | 0 | NA |
| 182 | 112.99 | temperature | 30 | 1440 | > th | dose dependent | sin | 5 | NA |
| 238 | 113.15 | temperature | 30 | 1440 | > th | dose independent | sin | 5 | NA |
| 394 | 113.55 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 450 | 113.69 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 456 | 113.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 509 | 113.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 563 | 113.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 581 | 113.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 16 |
| 583 | 113.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 586 | 113.94 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 592 | 113.94 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 22 |
| 608 | 113.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 12 |
| 677 | 114.06 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 889 | 114.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 19 |
| 907 | 114.17 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 915 | 114.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 916 | 114.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 23 |
| 920 | 114.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 924 | 114.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 15 |