Os01g0805400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os01g0805400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.74 | 0.584 | 7.55 | 2.49 | 1.37 | 1.45 | -0.537 | -0.213 | 0.764 | 19 | 27.6 | 10 | -- | -- |
| 154.67 | 0.584 | 7.55 | 2.45 | 1.36 | 1.46 | -0.543 | -- | 0.751 | 19 | 27.52 | 7 | -- | -- |
| 155.38 | 0.585 | 7.55 | 2.5 | 1.37 | 1.47 | -- | -0.198 | 0.761 | 18.9 | 27.66 | 7 | -- | -- |
| 155.43 | 0.584 | 7.55 | 2.46 | 1.36 | 1.48 | -- | -- | 0.755 | 18.9 | 27.56 | 7 | -- | -- |
| 242.12 | 0.729 | 7.54 | 2.41 | -- | 1.64 | -- | 0.29 | 0.655 | -- | 23.79 | 6 | -- | -- |
| 185.45 | 0.638 | 7.63 | 2.09 | 1.31 | -- | -0.703 | -- | 0.434 | 20.2 | -- | -- | -- | -- |
| 186.97 | 0.64 | 7.63 | 2.11 | 1.32 | -- | -- | -- | 0.434 | 20.2 | -- | -- | -- | -- |
| 242.23 | 0.728 | 7.54 | 2.45 | -- | 1.62 | -- | -- | 0.66 | -- | 23.71 | 6 | -- | -- |
| 300.48 | 0.812 | 7.66 | -- | 1.3 | 0.509 | -- | -- | 0.296 | 19.9 | 27.56 | 7 | -- | -- |
| 282.5 | 0.785 | 7.59 | 2.1 | -- | -- | -- | -- | 0.419 | -- | -- | -- | -- | -- |
| 304.61 | 0.816 | 7.68 | -- | 1.3 | -- | -- | -- | 0.199 | 20.3 | -- | -- | -- | -- |
| 388.75 | 0.921 | 7.62 | -- | -- | 0.812 | -- | -- | 0.281 | -- | 23.43 | 6 | -- | -- |
| 399.15 | 0.933 | 7.65 | -- | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 148.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 3 | 148.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 148.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 5 | 148.92 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 6 | 148.93 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 8 | 149.15 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 9 | 149.29 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 15 | 149.91 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 16 | 149.93 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 17 | 149.94 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 25 | 150.15 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 38 | 150.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 47 | 150.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 54 | 150.97 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 59 | 151.05 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 61 | 151.06 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 70 | 151.12 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 101 | 151.35 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 112 | 151.43 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 153 | 151.77 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 166 | 151.88 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 221 | 152.27 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 223 | 152.29 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 277 | 152.60 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 278 | 152.60 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 286 | 152.64 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 313 | 152.74 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 317 | 152.74 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 349 | 152.89 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 425 | 153.04 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 436 | 153.10 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 479 | 153.21 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 520 | 153.37 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 525 | 153.38 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 19 | 8 |
| 558 | 153.52 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 8 |
| 570 | 153.56 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 572 | 153.57 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 708 | 153.92 | atmosphere | 1005.0 | 14400 | < th | dose independent | no | NA | NA |
| 715 | 153.96 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 726 | 153.99 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 744 | 154.04 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 817 | 154.29 | wind | 9.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 826 | 154.31 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 19 | 3 |
| 835 | 154.35 | atmosphere | 1005.0 | 14400 | > th | dose independent | no | NA | NA |
| 853 | 154.44 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 3 | 23 |
| 869 | 154.48 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 897 | 154.56 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 983 | 154.83 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 3 |