Os01g0805200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0805200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.88 | 0.281 | 16.2 | -0.126 | 0.292 | -1.51 | -0.0613 | 0.4 | -0.0349 | 23.6 | 0.01108 | 704 | -- | -- |
| 36.05 | 0.28 | 16.2 | -0.131 | 0.306 | -1.54 | 0.00184 | -- | -0.037 | 0.0512 | 0.009995 | 698 | -- | -- |
| 35.9 | 0.279 | 16.2 | -0.124 | 0.292 | -1.51 | -- | 0.394 | -0.0354 | 23.6 | 0.009994 | 704 | -- | -- |
| 36.03 | 0.28 | 16.2 | -0.117 | 0.31 | -1.53 | -- | -- | -0.036 | 24 | 0.0006569 | 697 | -- | -- |
| 39.07 | 0.291 | 16.1 | -0.081 | -- | -1.53 | -- | 0.591 | -0.00966 | -- | 0.3598 | 759 | -- | -- |
| 40.94 | 0.3 | 16.2 | 0.0537 | 1.26 | -- | -0.115 | -- | 0.0315 | 18.5 | -- | -- | -- | -- |
| 40.98 | 0.3 | 16.2 | 0.0552 | 1.26 | -- | -- | -- | 0.0311 | 18.5 | -- | -- | -- | -- |
| 39.06 | 0.291 | 16.1 | -0.0863 | -- | -1.61 | -- | -- | -0.00749 | -- | 0.37 | 764 | -- | -- |
| 36.2 | 0.28 | 16.1 | -- | 0.389 | -1.58 | -- | -- | -0.0419 | 0.719 | 0.26 | 675 | -- | -- |
| 123.32 | 0.519 | 16.1 | 0.0235 | -- | -- | -- | -- | 0.00478 | -- | -- | -- | -- | -- |
| 41.06 | 0.3 | 16.2 | -- | 1.26 | -- | -- | -- | 0.0249 | 18.5 | -- | -- | -- | -- |
| 39.29 | 0.292 | 16.1 | -- | -- | -1.62 | -- | -- | -0.0129 | -- | 0.3769 | 764 | -- | -- |
| 123.33 | 0.518 | 16.1 | -- | -- | -- | -- | -- | 0.00218 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.69 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 2 | 25.77 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 4 | 25.87 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 8 | 26.25 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 9 | 26.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 10 | 26.41 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 11 | 26.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 12 | 26.43 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 18 | 26.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 20 | 26.61 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 21 | 26.61 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 24 | 26.61 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 25 | 26.61 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 27 | 26.61 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 32 | 26.62 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 34 | 26.64 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 35 | 26.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 4 |
| 36 | 26.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 38 | 26.77 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 40 | 26.78 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 45 | 26.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 47 | 26.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 48 | 26.90 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 51 | 26.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 52 | 26.90 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 53 | 26.90 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 58 | 26.92 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 59 | 26.92 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 63 | 26.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 67 | 26.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 20 |
| 69 | 26.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 90 | 27.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 95 | 27.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 96 | 27.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 109 | 27.24 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 131 | 27.49 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 148 | 27.63 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 158 | 27.66 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 242 | 27.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 263 | 27.96 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 267 | 27.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 270 | 27.99 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 294 | 28.12 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 296 | 28.12 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 320 | 28.26 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 328 | 28.30 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 330 | 28.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 334 | 28.31 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 336 | 28.31 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 337 | 28.31 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 339 | 28.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 340 | 28.31 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 363 | 28.33 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 382 | 28.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 454 | 28.64 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 492 | 28.78 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 493 | 28.78 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 519 | 28.86 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 526 | 28.88 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 531 | 28.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 9 |
| 532 | 28.89 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 533 | 28.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 553 | 28.95 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 562 | 29.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 563 | 29.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 568 | 29.02 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 577 | 29.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 580 | 29.05 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 585 | 29.05 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 590 | 29.05 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 591 | 29.05 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 593 | 29.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 597 | 29.05 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 5 |
| 605 | 29.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 609 | 29.07 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 618 | 29.10 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 634 | 29.13 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 8 |
| 687 | 29.21 | wind | 9.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 732 | 29.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 4 |
| 734 | 29.32 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 736 | 29.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 754 | 29.35 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 764 | 29.37 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 779 | 29.40 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 780 | 29.40 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 786 | 29.41 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 787 | 29.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 790 | 29.41 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 791 | 29.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 798 | 29.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 811 | 29.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 836 | 29.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 7 |
| 838 | 29.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 873 | 29.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 874 | 29.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 875 | 29.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 876 | 29.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 882 | 29.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 883 | 29.52 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 891 | 29.52 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 902 | 29.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 15 |
| 904 | 29.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 906 | 29.56 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 918 | 29.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 919 | 29.59 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 935 | 29.64 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 938 | 29.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 10 |
| 940 | 29.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 980 | 29.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 981 | 29.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 17 |
| 987 | 29.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 990 | 29.69 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 9 |