Os01g0804900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450.
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Os01g0804900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.16 | 0.556 | 7.33 | 2.4 | 0.382 | -2.77 | 0.478 | 2.78 | 0.616 | 8.58 | 21.9 | 5519 | -- | -- |
| 144.99 | 0.561 | 7.32 | 1.85 | 0.386 | -2.73 | 0.632 | -- | 0.893 | 7.98 | 21 | 9840 | -- | -- |
| 140.56 | 0.552 | 7.31 | 2.52 | 0.372 | -2.79 | -- | 3.32 | 0.61 | 8.69 | 22.4 | 5501 | -- | -- |
| 143.78 | 0.558 | 7.32 | 1.97 | 0.381 | -2.79 | -- | -- | 0.915 | 9.53 | 21 | 10575 | -- | -- |
| 146.04 | 0.563 | 7.33 | 2.8 | -- | -3.01 | -- | 5.42 | 0.402 | -- | 24.39 | 5334 | -- | -- |
| 365.44 | 0.896 | 7.57 | 0.385 | 0.486 | -- | 0.458 | -- | -0.185 | 10.2 | -- | -- | -- | -- |
| 366.26 | 0.896 | 7.57 | 0.404 | 0.483 | -- | -- | -- | -0.183 | 10.3 | -- | -- | -- | -- |
| 151.92 | 0.574 | 7.33 | 1.95 | -- | -2.8 | -- | -- | 0.922 | -- | 21.33 | 10717 | -- | -- |
| 196.64 | 0.653 | 7.42 | -- | 0.363 | -2.07 | -- | -- | 0.494 | 8.22 | 26.4 | 9668 | -- | -- |
| 380.48 | 0.911 | 7.58 | 0.397 | -- | -- | -- | -- | -0.185 | -- | -- | -- | -- | -- |
| 370.57 | 0.9 | 7.58 | -- | 0.48 | -- | -- | -- | -0.228 | 10.3 | -- | -- | -- | -- |
| 202.11 | 0.662 | 7.43 | -- | -- | -2.14 | -- | -- | 0.497 | -- | 26.3 | 9404 | -- | -- |
| 384.62 | 0.915 | 7.59 | -- | -- | -- | -- | -- | -0.229 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 125.36 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 8 | 125.90 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 12 | 126.27 | temperature | 20 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 13 | 126.34 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 16 | 126.48 | humidity | 90 | 43200 | > th | dose dependent | sin | 18 | NA |
| 17 | 126.55 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 30 | 127.19 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 40 | 127.57 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 78 | 128.97 | humidity | 90 | 43200 | > th | dose independent | rect. | 7 | 21 |
| 88 | 129.33 | humidity | 90 | 43200 | > th | dose independent | sin | 17 | NA |
| 89 | 129.33 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 90 | 129.35 | humidity | 90 | 43200 | < th | dose independent | rect. | 7 | 21 |
| 108 | 129.66 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 116 | 129.77 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 125 | 129.97 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 127 | 129.98 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 21 |
| 129 | 130.00 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 22 |
| 143 | 130.27 | temperature | 25 | 14400 | > th | dose dependent | rect. | 11 | 18 |
| 159 | 130.37 | temperature | 25 | 14400 | > th | dose dependent | rect. | 11 | 13 |
| 161 | 130.38 | temperature | 25 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 177 | 130.52 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 23 |
| 205 | 130.64 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 23 |
| 209 | 130.67 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 234 | 130.78 | temperature | 25 | 14400 | > th | dose dependent | sin | 18 | NA |
| 244 | 130.83 | humidity | 90 | 43200 | < th | dose independent | sin | 17 | NA |
| 246 | 130.85 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 263 | 130.95 | temperature | 20 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 267 | 130.96 | temperature | 20 | 43200 | > th | dose independent | rect. | 12 | 11 |
| 274 | 130.99 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 291 | 131.05 | humidity | 90 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 350 | 131.27 | temperature | 20 | 43200 | < th | dose independent | rect. | 12 | 11 |
| 372 | 131.33 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 394 | 131.44 | temperature | 25 | 14400 | > th | dose dependent | rect. | 21 | 21 |
| 407 | 131.49 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 444 | 131.59 | temperature | 25 | 14400 | > th | dose dependent | rect. | 2 | 22 |
| 455 | 131.62 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 497 | 131.68 | temperature | 25 | 14400 | > th | dose dependent | rect. | 1 | 19 |
| 543 | 131.78 | temperature | 25 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 584 | 131.88 | humidity | 90 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 588 | 131.89 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 646 | 132.09 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 649 | 132.10 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 652 | 132.11 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 664 | 132.15 | humidity | 90 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 681 | 132.19 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 692 | 132.23 | humidity | 90 | 43200 | < th | dose independent | no | NA | NA |
| 738 | 132.36 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 753 | 132.40 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 761 | 132.45 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 769 | 132.47 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 781 | 132.51 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 827 | 132.66 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 876 | 132.86 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 17 |
| 890 | 132.92 | temperature | 20 | 43200 | > th | dose independent | sin | 17 | NA |
| 972 | 133.16 | temperature | 20 | 43200 | < th | dose independent | sin | 16 | NA |