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Os01g0804400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0389) R2 : 0.806
β1 : -- (--) R2dD : -- R2D : --
β2 : 5.31 (0.127) R2dC : 1.29 R2C : 0.392
β3 : 4.31 (0.196) R2dE : 0.355 R2E : -0.501
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.678 (0.0818) R2dN8 : 0.0379 R2N8 : 0.038
σ : 0.725
deviance : 242.08
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C
peak time of C : 8.69
E
wheather : temperature
threshold : 32.89
memory length : 223
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17.1
open length of G : 7.93

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
211.4 0.683 12.8 -0.497 4.98 4.32 4.53 4.09 -0.715 8.67 30.96 233 17.4 7.8
226.06 0.7 12.8 -0.15 5.11 4.16 2.62 -- -0.699 8.61 31.95 211 17.4 7.8
263.71 0.756 12.9 -0.214 4.67 3.7 -- 2.12 -0.672 8.38 29.61 179 17.3 8.35
242.76 0.726 12.8 -0.0429 5.16 4.2 -- -- -0.668 8.64 32.12 212 17.3 7.84
331.27 0.848 12.9 -0.55 -- 4.67 -- 1.89 -0.623 -- 47.2 503 20.7 12.9
359.02 0.888 12.9 -0.547 3.85 -- 3.41 -- -0.968 7.39 -- -- -- --
390.71 0.926 12.9 -0.471 3.85 -- -- -- -0.975 7.37 -- -- -- --
308.66 0.818 13 -0.255 -- 4.23 -- -- -0.729 -- 74.17 381 20.1 15.7
242.08 0.725 12.8 -- 5.31 4.31 -- -- -0.678 8.69 32.89 223 17.1 7.93
1180.5 1.61 13 -0.407 -- -- -- -- -0.911 -- -- -- -- --
396.56 0.932 12.9 -- 3.85 -- -- -- -0.922 7.38 -- -- -- --
309.97 0.82 13 -- -- 4.24 -- -- -0.714 -- 72.28 382 20.1 15.6
1184.87 1.61 13 -- -- -- -- -- -0.866 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 216.30 temperature 30.0 270 < th dose dependent rect. 17 8
3 217.98 temperature 10.0 270 > th dose dependent rect. 13 19
7 218.64 temperature 10.0 270 > th dose dependent rect. 14 16
15 220.92 temperature 25.0 270 > th dose independent rect. 13 6
32 223.29 temperature 30.0 10 < th dose dependent rect. 19 7
45 226.62 temperature 30.0 270 < th dose dependent rect. 9 15
47 227.35 wind 1.0 270 > th dose independent rect. 13 6
50 227.98 wind 9.0 270 < th dose independent rect. 13 6
52 228.29 temperature 25.0 270 > th dose independent rect. 15 2
57 228.83 temperature 10.0 270 > th dose dependent rect. 13 6
65 229.87 temperature 10.0 270 > th dose independent rect. 13 6
67 229.87 atmosphere 1010.0 270 < th dose independent rect. 13 6
69 229.87 temperature 10.0 270 > th dose independent rect. 19 18
70 229.87 atmosphere 995.0 270 > th dose independent rect. 19 18
76 230.61 atmosphere 1015.0 270 < th dose independent rect. 23 10
78 230.63 wind 9.0 270 < th dose independent rect. 19 18
81 231.37 precipitation 0.1 270 < th dose independent rect. 13 6
82 231.37 precipitation 0.1 270 < th dose dependent rect. 13 6
84 231.59 radiation 1.0 270 < th dose dependent sin 15 NA
97 232.73 radiation 1.0 270 > th dose independent rect. 14 4
99 232.86 radiation 1.0 270 > th dose independent rect. 15 2
100 232.98 temperature 10.0 90 > th dose dependent rect. 15 6
102 233.00 wind 1.0 270 > th dose independent rect. 15 2
104 233.10 wind 9.0 270 < th dose independent rect. 15 2
117 233.41 temperature 15.0 10 > th dose dependent rect. 16 14
119 233.49 humidity 90.0 270 < th dose independent rect. 15 2
122 234.05 radiation 40.0 270 < th dose independent rect. 15 2
124 234.49 wind 1.0 270 > th dose dependent rect. 15 2
125 234.55 temperature 10.0 270 > th dose independent rect. 15 2
127 234.55 atmosphere 1010.0 270 < th dose independent rect. 15 2
129 234.55 temperature 10.0 270 > th dose independent rect. 17 22
134 234.96 precipitation 0.1 270 < th dose independent rect. 19 18
135 234.96 precipitation 0.1 270 < th dose dependent rect. 19 18
150 235.14 atmosphere 995.0 270 > th dose independent rect. 13 6
155 235.36 temperature 15.0 270 > th dose independent rect. 23 10
161 235.56 humidity 60.0 270 > th dose independent rect. 23 10
162 235.57 radiation 1.0 270 < th dose independent sin 15 NA
163 235.57 temperature 30.0 270 < th dose dependent rect. 21 1
169 235.75 radiation 1.0 270 > th dose independent sin 15 NA
177 235.97 atmosphere 995.0 270 > th dose independent rect. 23 10
178 235.97 temperature 10.0 270 > th dose independent rect. 9 14
179 236.00 wind 9.0 270 < th dose independent rect. 23 10
185 236.33 precipitation 0.1 270 < th dose independent rect. 15 2
186 236.33 precipitation 0.1 270 < th dose dependent rect. 15 2
188 236.39 radiation 40.0 270 < th dose independent rect. 23 10
217 237.60 wind 9.0 270 < th dose independent rect. 17 22
246 238.30 atmosphere 995.0 270 > th dose independent rect. 15 2
256 238.77 temperature 10.0 270 > th dose dependent rect. 15 2
264 239.01 temperature 15.0 10 > th dose dependent rect. 16 16
265 239.28 humidity 90.0 270 < th dose independent rect. 13 6
268 239.44 humidity 90.0 270 < th dose independent rect. 14 4
287 240.20 temperature 30.0 270 < th dose independent rect. 23 10
303 240.76 precipitation 0.1 270 < th dose independent rect. 23 10
304 240.76 precipitation 0.1 270 < th dose dependent rect. 23 10
310 240.83 temperature 30.0 270 < th dose dependent sin 17 NA
315 241.01 radiation 20.0 30 < th dose independent rect. 12 9
324 241.40 temperature 20.0 10 > th dose independent rect. 15 6
334 241.86 wind 9.0 270 < th dose independent rect. 9 14
339 242.02 radiation 1.0 270 < th dose dependent rect. 16 9
347 242.33 temperature 15.0 10 > th dose dependent rect. 16 18
371 242.86 radiation 40.0 90 < th dose independent rect. 15 6
381 243.25 temperature 10.0 90 > th dose independent rect. 15 6
383 243.25 atmosphere 1010.0 90 < th dose independent rect. 15 6
385 243.25 temperature 10.0 90 > th dose independent rect. 21 18
393 243.38 humidity 50.0 270 > th dose independent rect. 19 18
443 244.54 wind 9.0 90 < th dose independent rect. 21 18
444 244.55 humidity 50.0 270 > th dose independent rect. 13 6
447 244.71 precipitation 0.1 90 < th dose independent rect. 21 18
448 244.71 precipitation 0.1 90 < th dose dependent rect. 21 18
453 244.88 radiation 1.0 270 < th dose independent rect. 17 8
455 244.94 temperature 10.0 10 > th dose dependent rect. 15 6
467 245.15 atmosphere 995.0 90 > th dose independent rect. 21 18
470 245.17 radiation 40.0 10 < th dose dependent rect. 14 7
550 246.58 precipitation 0.1 10 < th dose independent rect. 15 6
551 246.58 precipitation 0.1 10 < th dose dependent rect. 15 6
589 247.64 wind 1.0 10 > th dose independent rect. 15 6
592 247.79 wind 9.0 10 < th dose independent rect. 15 6
613 248.18 atmosphere 995.0 10 > th dose independent rect. 15 6
630 248.49 temperature 10.0 270 > th dose dependent rect. 23 9
647 248.77 temperature 10.0 10 > th dose independent rect. 15 6
649 248.77 atmosphere 1010.0 10 < th dose independent rect. 15 6
651 248.77 temperature 10.0 10 > th dose independent rect. 21 18
652 248.77 atmosphere 995.0 10 > th dose independent rect. 21 18
701 249.59 wind 9.0 10 < th dose independent rect. 21 18
742 250.15 temperature 10.0 1440 > th dose independent rect. 16 6
745 250.15 temperature 10.0 1440 > th dose independent rect. 22 18
756 250.24 radiation 1.0 270 < th dose dependent rect. 8 17
765 250.34 wind 1.0 270 > th dose independent rect. 19 18
767 250.36 wind 9.0 270 < th dose independent rect. 1 17
816 250.94 temperature 20.0 90 > th dose independent rect. 15 18
832 251.12 precipitation 0.1 270 < th dose independent rect. 9 14
833 251.12 precipitation 0.1 270 < th dose dependent rect. 9 14
843 251.23 humidity 60.0 270 > th dose independent rect. 18 7
847 251.33 atmosphere 995.0 270 > th dose dependent rect. 15 2
850 251.36 wind 9.0 270 < th dose dependent rect. 23 10
877 251.59 temperature 30.0 270 < th dose independent rect. 18 7
906 252.08 temperature 30.0 270 < th dose independent rect. 19 18
925 252.35 atmosphere 995.0 270 > th dose independent rect. 18 7
942 252.54 temperature 10.0 270 > th dose independent rect. 18 7
944 252.54 radiation 20.0 270 < th dose independent rect. 18 7
947 252.54 temperature 10.0 270 > th dose independent rect. 1 17
948 252.54 atmosphere 1015.0 270 < th dose independent rect. 1 17
957 252.67 wind 9.0 270 < th dose independent rect. 18 7
972 252.79 atmosphere 1015.0 270 < th dose independent rect. 23 20
977 252.82 radiation 40.0 90 < th dose dependent rect. 15 4