Os01g0804200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os01g0804200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.37 | 0.551 | 11.1 | 1.83 | 1.63 | -3.78 | 0.686 | 0.735 | 0.0668 | 8.92 | 10.62 | 415 | -- | -- |
| 137.76 | 0.547 | 11.1 | 1.71 | 1.64 | -3.74 | 0.638 | -- | 0.0359 | 8.94 | 13.35 | 412 | -- | -- |
| 138.75 | 0.549 | 11.1 | 1.76 | 1.58 | -3.78 | -- | 0.172 | 0.0327 | 8.75 | 10.91 | 447 | -- | -- |
| 138.73 | 0.549 | 11.1 | 1.74 | 1.58 | -3.74 | -- | -- | 0.0366 | 8.67 | 10.93 | 457 | -- | -- |
| 230.3 | 0.707 | 10.9 | 2.25 | -- | -4.02 | -- | 2.25 | 0.409 | -- | 21.26 | 566 | -- | -- |
| 294.14 | 0.804 | 11.2 | 0.879 | 2.49 | -- | 0.939 | -- | -0.516 | 7.77 | -- | -- | -- | -- |
| 296.65 | 0.807 | 11.2 | 0.902 | 2.49 | -- | -- | -- | -0.518 | 7.74 | -- | -- | -- | -- |
| 230.73 | 0.707 | 11.1 | 1.81 | -- | -3.83 | -- | -- | 0.132 | -- | 21.95 | 585 | -- | -- |
| 209.89 | 0.675 | 11.2 | -- | 1.8 | -2.96 | -- | -- | -0.257 | 8.5 | 12.29 | 410 | -- | -- |
| 630.98 | 1.17 | 11.3 | 0.934 | -- | -- | -- | -- | -0.482 | -- | -- | -- | -- | -- |
| 318.12 | 0.834 | 11.2 | -- | 2.5 | -- | -- | -- | -0.618 | 7.72 | -- | -- | -- | -- |
| 304.48 | 0.813 | 11.2 | -- | -- | -3.44 | -- | -- | -0.305 | -- | 24.1 | 594 | -- | -- |
| 653.98 | 1.19 | 11.3 | -- | -- | -- | -- | -- | -0.586 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.03 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 22 |
| 9 | 132.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 35 | 137.88 | temperature | 15 | 270 | > th | dose dependent | sin | 18 | NA |
| 62 | 140.23 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 63 | 140.24 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 69 | 140.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 70 | 140.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 79 | 140.93 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 8 |
| 93 | 141.36 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 113 | 141.69 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 117 | 141.79 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 136 | 141.89 | radiation | 1 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 143 | 141.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 149 | 142.02 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 195 | 142.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 12 |
| 197 | 142.67 | temperature | 15 | 1440 | > th | dose dependent | sin | 8 | NA |
| 281 | 143.17 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 400 | 144.43 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 511 | 145.49 | temperature | 30 | 270 | < th | dose dependent | sin | 18 | NA |
| 699 | 146.83 | temperature | 15 | 720 | > th | dose dependent | sin | 23 | NA |
| 797 | 147.53 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 817 | 147.65 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 949 | 148.24 | radiation | 1 | 14400 | > th | dose independent | sin | 10 | NA |