Os01g0803900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os01g0803900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.68 | 0.596 | 3.5 | -0.659 | 0.19 | -0.35 | -0.249 | 0.165 | -0.0793 | 5.1 | 19.47 | 88 | -- | -- |
| 160.43 | 0.594 | 3.49 | -0.66 | 0.145 | -0.278 | -0.338 | -- | -0.0527 | 6.34 | 19.47 | 88 | -- | -- |
| 160.57 | 0.595 | 3.49 | -0.664 | 0.156 | -0.315 | -- | 0.0732 | -0.0511 | 4.83 | 19.47 | 80 | -- | -- |
| 160.6 | 0.594 | 3.49 | -0.667 | 0.156 | -0.314 | -- | -- | -0.0515 | 4.83 | 19.59 | 81 | -- | -- |
| 161.76 | 0.596 | 3.49 | -0.657 | -- | -0.28 | -- | 0.0738 | -0.0481 | -- | 19.58 | 76 | -- | -- |
| 164.59 | 0.601 | 3.49 | -0.64 | 0.238 | -- | -0.284 | -- | -0.0561 | 9.74 | -- | -- | -- | -- |
| 164.89 | 0.601 | 3.49 | -0.65 | 0.239 | -- | -- | -- | -0.0564 | 9.89 | -- | -- | -- | -- |
| 161.79 | 0.595 | 3.49 | -0.661 | -- | -0.279 | -- | -- | -0.0485 | -- | 19.59 | 81 | -- | -- |
| 172.32 | 0.615 | 3.47 | -- | 0.139 | -0.292 | -- | -- | 0.0223 | 5.42 | 19.59 | 81 | -- | -- |
| 168.32 | 0.606 | 3.49 | -0.653 | -- | -- | -- | -- | -0.0563 | -- | -- | -- | -- | -- |
| 176.04 | 0.621 | 3.47 | -- | 0.241 | -- | -- | -- | 0.0161 | 10.1 | -- | -- | -- | -- |
| 173.1 | 0.615 | 3.48 | -- | -- | -0.281 | -- | -- | 0.0225 | -- | 19.98 | 82 | -- | -- |
| 179.57 | 0.625 | 3.48 | -- | -- | -- | -- | -- | 0.0161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.42 | wind | 3.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 2 | 147.54 | wind | 3.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 3 | 147.67 | temperature | 25.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 5 | 147.74 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 7 | 147.86 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 8 | 147.90 | radiation | 40.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 10 | 147.91 | humidity | 60.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 12 | 147.98 | radiation | 20.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 13 | 147.98 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 16 | 148.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 20 | 148.02 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 23 | 148.02 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 24 | 148.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 29 | 148.02 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 30 | 148.05 | temperature | 30.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 37 | 148.14 | temperature | 10.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 40 | 148.14 | humidity | 90.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 41 | 148.14 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 43 | 148.14 | radiation | 1.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 44 | 148.14 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 10 | 1 |
| 45 | 148.14 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 46 | 148.14 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 47 | 148.16 | wind | 1.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 51 | 148.23 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 52 | 148.26 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 53 | 148.29 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 59 | 148.45 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 60 | 148.45 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 72 | 148.81 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 23 |
| 81 | 149.17 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 109 | 149.94 | wind | 1.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 124 | 151.66 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 11 | 23 |
| 125 | 151.66 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 127 | 152.50 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 133 | 153.89 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 11 | 23 |
| 135 | 154.26 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 137 | 154.32 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 24 | 9 |
| 142 | 155.06 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 2 | 7 |
| 143 | 155.08 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 146 | 155.15 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 152 | 155.54 | humidity | 50.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 158 | 155.82 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 13 |
| 160 | 155.89 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 14 |
| 170 | 156.09 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 9 |
| 171 | 156.12 | humidity | 70.0 | 30 | < th | dose independent | rect. | 8 | 3 |
| 193 | 156.54 | temperature | 25.0 | 30 | > th | dose independent | rect. | 3 | 6 |
| 201 | 156.66 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 244 | 157.08 | temperature | 25.0 | 10 | > th | dose independent | rect. | 20 | 13 |
| 337 | 157.63 | radiation | 40.0 | 90 | > th | dose independent | rect. | 14 | 21 |
| 368 | 157.85 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 14 | 20 |
| 372 | 157.87 | radiation | 20.0 | 90 | > th | dose independent | rect. | 14 | 21 |
| 376 | 157.90 | radiation | 20.0 | 90 | > th | dose independent | rect. | 16 | 19 |
| 416 | 158.14 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 14 | 21 |
| 487 | 158.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 488 | 158.23 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 494 | 158.28 | radiation | 40.0 | 90 | > th | dose dependent | sin | 12 | NA |
| 509 | 158.35 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 514 | 158.38 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 5 |
| 611 | 158.66 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 16 | 19 |
| 639 | 158.73 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 7 | 4 |
| 690 | 158.89 | temperature | 25.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 700 | 158.94 | radiation | 40.0 | 90 | < th | dose independent | rect. | 11 | 22 |
| 711 | 158.99 | radiation | 40.0 | 90 | > th | dose independent | sin | 11 | NA |
| 724 | 159.02 | wind | 1.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 800 | 159.13 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 3 |
| 808 | 159.16 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 847 | 159.24 | humidity | 70.0 | 30 | < th | dose independent | rect. | 16 | 19 |
| 873 | 159.32 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 14 |
| 885 | 159.36 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 954 | 159.47 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 3 |
| 965 | 159.49 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 12 |
| 970 | 159.51 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 14 |
| 982 | 159.54 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 5 |
| 997 | 159.58 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 8 |