Os01g0803300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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Os01g0803300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 715.47 | 1.26 | 5.95 | -0.929 | 3.17 | 3.27 | -1.82 | 0.783 | 0.843 | 8.69 | 14.63 | 734 | 2.87 | 2.05 |
| 715.08 | 1.25 | 5.95 | -0.986 | 3.21 | 3.24 | -1.42 | -- | 0.857 | 8.74 | 14.63 | 736 | 2.78 | 2.05 |
| 723 | 1.25 | 5.94 | -0.955 | 3.49 | 3.01 | -- | -0.0405 | 0.893 | 8.76 | 15.16 | 730 | 2.9 | 1.92 |
| 720.8 | 1.25 | 5.97 | -1.1 | 3.17 | 3.25 | -- | -- | 0.808 | 8.76 | 14.5 | 737 | 2.73 | 2.1 |
| 760.46 | 1.28 | 6.06 | -1.6 | -- | 5.71 | -- | 0.243 | 0.67 | -- | 6.344 | 752 | 1.62 | 3.22 |
| 914.33 | 1.42 | 5.78 | -0.51 | 5.84 | -- | -0.341 | -- | 1.32 | 8.95 | -- | -- | -- | -- |
| 914.73 | 1.42 | 5.78 | -0.521 | 5.84 | -- | -- | -- | 1.32 | 8.96 | -- | -- | -- | -- |
| 736.66 | 1.26 | 6.05 | -1.12 | -- | 5.73 | -- | -- | 0.844 | -- | 5.911 | 739 | 1.18 | 4.1 |
| 750.1 | 1.28 | 5.96 | -- | 3.12 | 3.16 | -- | -- | 0.967 | 8.67 | 13.16 | 742 | 2.73 | 2.1 |
| 2868.27 | 2.5 | 5.93 | -0.526 | -- | -- | -- | -- | 1.35 | -- | -- | -- | -- | -- |
| 921.88 | 1.42 | 5.76 | -- | 5.84 | -- | -- | -- | 1.37 | 8.96 | -- | -- | -- | -- |
| 767.52 | 1.29 | 6.01 | -- | -- | 5.63 | -- | -- | 1.02 | -- | 4.388 | 736 | 1.15 | 4.17 |
| 2875.56 | 2.5 | 5.92 | -- | -- | -- | -- | -- | 1.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 710.72 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 4 | 712.22 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 6 | 712.94 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 16 | 715.80 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 19 | 715.97 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 23 | 716.61 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 24 | 716.95 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 34 | 717.20 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 38 | 718.13 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 39 | 718.18 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 42 | 718.24 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 49 | 718.45 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 55 | 719.32 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 2 |
| 64 | 720.39 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 66 | 720.40 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 17 | 20 |
| 68 | 720.43 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 75 | 721.27 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 76 | 721.44 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 86 | 722.56 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 13 | 18 |
| 89 | 722.60 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 92 | 722.63 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 95 | 722.64 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 111 | 723.05 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 112 | 723.06 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 113 | 723.06 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 116 | 723.06 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 141 | 723.32 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 149 | 723.65 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 160 | 724.05 | radiation | 40.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 173 | 724.22 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 178 | 724.27 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 15 | 18 |
| 190 | 724.66 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 198 | 724.83 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 218 | 725.06 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 24 | 14 |
| 248 | 725.67 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 262 | 725.73 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 282 | 725.98 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 292 | 726.16 | radiation | 20.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 295 | 726.17 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 300 | 726.33 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 320 | 726.68 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 16 | 7 |
| 321 | 726.68 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 322 | 726.68 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 353 | 726.98 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 360 | 727.01 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 382 | 727.09 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 415 | 727.37 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 23 | 15 |
| 425 | 727.40 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 14 | 9 |
| 459 | 727.55 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 2 | 10 |
| 462 | 727.57 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 467 | 727.61 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 504 | 728.05 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 523 | 728.25 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 549 | 728.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 551 | 728.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 579 | 728.77 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 581 | 728.77 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 589 | 728.93 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 620 | 729.24 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 773 | 730.14 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 2 | 15 |
| 776 | 730.14 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 22 | 19 |
| 781 | 730.15 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 802 | 730.16 | radiation | 40.0 | 43200 | < th | dose independent | no | NA | NA |
| 847 | 730.16 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 906 | 730.31 | humidity | 60.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 923 | 730.50 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |