Os01g0801700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0801700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.81 | 0.277 | 11.3 | 0.416 | 0.774 | 1.11 | 0.517 | 0.692 | -0.0893 | 10.4 | 22.6 | 67 | -- | -- |
| 35.09 | 0.278 | 11.3 | 0.477 | 0.786 | 0.941 | 0.375 | -- | -0.0711 | 10.3 | 23.11 | 54 | -- | -- |
| 35.53 | 0.28 | 11.3 | 0.46 | 0.785 | 1.03 | -- | 0.302 | -0.0832 | 10.3 | 22.6 | 67 | -- | -- |
| 35.62 | 0.28 | 11.3 | 0.491 | 0.783 | 0.96 | -- | -- | -0.0737 | 10.3 | 22.89 | 59 | -- | -- |
| 66.51 | 0.38 | 11.3 | 0.413 | -- | 0.911 | -- | 0.455 | -0.105 | -- | 22.28 | 372 | -- | -- |
| 46.23 | 0.319 | 11.3 | 0.284 | 0.68 | -- | 0.386 | -- | -0.197 | 9.82 | -- | -- | -- | -- |
| 46.79 | 0.32 | 11.3 | 0.298 | 0.679 | -- | -- | -- | -0.196 | 9.76 | -- | -- | -- | -- |
| 62.63 | 0.369 | 11.3 | 0.523 | -- | 0.831 | -- | -- | -0.0255 | -- | 28.73 | 719 | -- | -- |
| 41.44 | 0.301 | 11.3 | -- | 0.759 | 0.766 | -- | -- | -0.149 | 10.1 | 22.87 | 42 | -- | -- |
| 74.24 | 0.403 | 11.4 | 0.292 | -- | -- | -- | -- | -0.196 | -- | -- | -- | -- | -- |
| 49.14 | 0.328 | 11.3 | -- | 0.678 | -- | -- | -- | -0.23 | 9.72 | -- | -- | -- | -- |
| 69.04 | 0.387 | 11.3 | -- | -- | 0.628 | -- | -- | -0.119 | -- | 29 | 710 | -- | -- |
| 76.48 | 0.408 | 11.4 | -- | -- | -- | -- | -- | -0.228 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.22 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 15 |
| 16 | 30.71 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 23 | 30.87 | temperature | 25 | 90 | < th | dose dependent | sin | 10 | NA |
| 64 | 31.43 | temperature | 25 | 270 | < th | dose dependent | sin | 13 | NA |
| 97 | 31.69 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 8 |
| 132 | 32.01 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 143 | 32.06 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 371 | 33.80 | temperature | 20 | 90 | < th | dose independent | sin | 10 | NA |
| 387 | 33.89 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 15 |
| 394 | 33.92 | temperature | 10 | 90 | > th | dose dependent | sin | 10 | NA |
| 420 | 34.08 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 12 |
| 421 | 34.08 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 17 |
| 424 | 34.10 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 10 |
| 439 | 34.18 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 445 | 34.19 | temperature | 20 | 90 | > th | dose independent | rect. | 6 | 23 |
| 460 | 34.25 | temperature | 20 | 90 | > th | dose independent | sin | 10 | NA |
| 468 | 34.28 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 14 |
| 618 | 34.71 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 10 |
| 725 | 34.98 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 11 |
| 873 | 35.36 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 9 |
| 901 | 35.43 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 23 |